Salvelinus sp. IW2-2015 (Arctic char): 111963888
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Entry
111963888 CDS
T05762
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04140
Autophagy - animal
salp04144
Endocytosis
salp04145
Phagosome
salp04148
Efferocytosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111963888
04145 Phagosome
111963888
04140 Autophagy - animal
111963888
04137 Mitophagy - animal
111963888
04148 Efferocytosis
111963888
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111963888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963888
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111963888
04031 GTP-binding proteins [BR:
salp04031
]
111963888
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
111963888
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111963888
Exosomal proteins of other body fluids (saliva and urine)
111963888
Exosomal proteins of colorectal cancer cells
111963888
Exosomal proteins of bladder cancer cells
111963888
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
111963888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
cobW
ATP_bind_1
PduV-EutP
nSTAND3
Septin
AAA_16
DUF5992
NTPase_1
AAA_7
AAA_22
AAA_24
G-alpha
AAA_5
SRPRB
ATPase_2
NACHT
NB-ARC
AAA_14
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
111963888
NCBI-ProteinID:
XP_023843218
LinkDB
All DBs
Position
LG5:10177808..10185427
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPAAPSDGCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggatacggcggggcaggagcggttccagtctctgggcgtggcgttctaccgcggr
gctgactgctgtgtgctggtctacgacgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagaacagcatcccgtactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgccctgaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgcccccagc
gacggctgctcctgctga
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