Salvelinus sp. IW2-2015 (Arctic char): 111963933
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Entry
111963933 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111963933
04518 Integrin signaling
111963933
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111963933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111963933
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111963933
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_PBP1
Fn3_Dep-1_2nd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_1st
FN3_Tor_3rd
DUF7949
EGF
hEGF
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
111963933
NCBI-ProteinID:
XP_023843297
LinkDB
All DBs
AA seq
1759 aa
AA seq
DB search
MGTKSFLGCVFLTLLLNLCQAGLVRKLLRHKRATLTTPGGNNVTLTSADQPVVFNHVYNI
NVPSGSLCSVDLDALGSTSLKPQDAALPSGLRTTEHTLDGQNQIVFTHRINIPQQECACT
DGLPDLKDLLSRLEMLEGEVSTLRDQCASGDAGCCSVQPVTGEVGTKPYCNGHGNYRADT
CGCICEPGWKGPNCTESECPNNCQDQGRCVDGKCVCFEGFGRDDCSLKVCKVDCGGNGNV
IGGVCVCAKGFTWRDCFSDRLPTCLGHGKCVDGECXCGEAWTGTTARTHLPNGCYDRGRC
VNGPATCEEGFTGVDCSQLACPNNCHNRGQCVRRAVASAHVGYQGEDCSELSCPNNCQEG
RCVDGKCVCFEGLAGTTGYTGEDCFSDRLLNNCLGHGKCVDGECMCEEPWTGYDCSELIC
PNDCYDRGRCVNGXCYCEEGFIGEDCGEKTCPSDCLGNGFCVDGQCVCSVATLERTAQLT
CPSDCNDRGVCFNGNVYCNAGYXGEDCSQLACPNNCXNRGQCVNGECVCNVGYQGRGLFE
LSCPNNALNRGRCVNGQCVCDEGFGGEDCSIKICPSDCYGSGDCVDGRCVCYAGFTGEDC
SELSCPNNCLNRGRCVDGQCVCDEGFTGEDCTEKHCPNDCLDRGYCVDGKCVCLEGYAGV
DCSELTCPDNCNNRGHCVNGKCMCEERYMGDNCGELSCLNNCQDMGRCVNGQCLCDEGYI
GEDCSEVSPPKDLTVTEVTTETVDLTWNNEMLVTEYLIAYVPTSPGGLYQEFRVPGDKTA
ATVSELEPGIEYLINVYAILSNKKSIPISARVATNLPEPDGLKFKSVRDTSVEVLWDQLD
IPFDAWELYVRNTKEENGKILTTLPSSQTMYEQSGLGPGQEYEVSVGIIKNNTRGPQSTK
IITTRIDGPRQVEVRDVTDCSGLVTWFQPVAQVDGVTVSYGPSSQPTERTSVDLSTSDKQ
YSIDSLSPDTEYQVSLISRRGDTTSEPVSEIFTTDLDAPKDLQPLGQTEDSVTLEWRNSR
ADVDSYRVKYSPISGGSHGEEVFPRGSGDNTQATITGMKPGTEYGIGVTAVKNERESLPA
TTNAATDLDGPKDLEVSESTETSMTLVWXTPRAKITIYRLVYISRDGRREEVEVPGTATT
YVLNNLTPGMLYTITLVAERGSKKSTPVTLSASTEDLRPVVANLTVSDVTWDSFNVSWTP
EDGEFESFVIEVTNLQEGLESENLTLSGDAFSLGISGLSPNTSYRIGLYGLHKGSFQEPV
YTEVTTGLGAPRGIRFSEVTESSAIVHWTMPRARVDSYRIIYVPLQGGSPMTVLADGTET
QALLPNMLPGVTYQVTIFSTKGLEESDPGTDTITTALDRPQGLSAVNVTDTTALLLWQPT
RANVDGYVITYSADSVSPVMEYVSGNTVEFEMGSLVPATHYTVGVYAMREALKSGTTTTE
FTTDVDSPRDLAASNVQTDSATLTWKPPRADITGYVLTFTSSDSTVREVVLSPTATSYSM
TQLSATTDYNVRLQAXAGAQRSRHVTTVFTTIGVLYRYPKDCSQALLNGDTTSGIYTIYV
GGEESQPIQVYCDMTTDGGGWMVFLRRQSGKLEFFRNWKNYTGGFGDINGEFWFGLANLH
KMTTAGQYELRVDLRDNGESAYAQYDKFTIAEPRSRYKIHIGGFSGTAGDSMTYHQGRPF
STYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDDSHSKGINWFHWKGHEHSIQFA
EMKIRPVNFRNFESRRKRS
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgggtactaaaagctttttagggtgtgtcttcctgactctccttctcaacctctgccag
gctgggctggtgagaaaattacttagacataaacgggcgaccttgaccacccctggcgga
aacaatgtgaccctgaccagcgctgaccaaccagtggtcttcaaccacgtctacaacatc
aacgtcccttccggctcactatgctcagtggacctggatgccctaggaagcaccagcctc
aagccccaggacgcagctctgccttcaggcctccgcaccaccgaacataccctggatggg
cagaaccagatagttttcactcaccgcattaacattcctcagcaggagtgtgcatgcact
gatgggctcccggatctgaaggacctcctgagcagattggagatgctggagggagaggtg
tccacgctgagagatcaatgcgctagtggagacgctggctgctgcagcgttcagccagtc
acaggtgaggtggggactaagccttattgcaatggccatggcaactacagagctgacacc
tgtggttgcatttgcgagcctggctggaagggacccaactgcaccgagtctgaatgcccc
aacaactgccaggaccaaggtcgctgtgtggatgggaagtgcgtctgctttgagggcttt
ggcagggacgactgttcactcaaggtttgcaaagtggactgtggtgggaacggaaatgtt
attggtggggtctgtgtctgtgccaaagggtttacctggagagactgtttctcagacaga
ctgcctacatgcctaggccatggaaagtgtgtggacggggagtgtnngtgtggagaagcc
tggacgggaacgactgctcgaactcatctgcccaatggatgctatgaccgcggccgctgc
gtcaatggacctgctacatgcgaagaaggattcaccggggtggattgtagccagctggct
tgccccaacaactgccataacaggggacagtgtgtcagacgggcagtggcgtctgcacat
gtaggctaccagggagaggactgttctgaactctcctgccccaacaactgccaggaaggt
cgctgcgtggatgggaagtgcgtctgctttgagggtttggcagggacgactggttacact
ggagaggactgtttctcagacagactgctgaacaactgcctaggccatggaaagtgtgtg
gacggggagtgtatgtgtgaagagccctggacgggatacgactgctccgaactcatctgc
ccaaatgactgctacgaccgcggccgctgcgtcaatgganattgctactgcgaagaagga
ttcatcggagaggactgtggggagaaaacctgcccaagcgactgcctgggaaatggtttt
tgtgtggacggccagtgtgtctgcagcgtggctacactggagaggactgctcagctcacc
tgccccagtgactgcaacgatagaggtgtctgcttcaatggcaatgtgtattgcaatgct
ggctacncaggagaggattgtagccagctggcttgccccaacaactgcnataacagggga
cagtgtgtcaacggggagtgcgtctgcaatgtaggctaccagggaagaggactgtttgag
ctctcctgccccaacaacgccctcaaccggggccgctgtgtcaacggacagtgtgtgtgc
gatgaagggttcggtggtgaggactgcagtatcaagatctgcccctcagactgctatggc
agtggagattgtgtggatggccggtgtgtctgctatgctggcttcaccggtgaggactgc
agcgagctgagctgccccaacaactgcctgaaccgcggacgctgcgttgacgggcagtgc
gtctgcgacgagggctttacaggggaagactgcactgagaagcactgtcccaatgactgc
ctggacaggggatactgcgtggatggcaaatgtgtctgcctggagggctatgcgggtgtc
gactgctctgaactcacctgccctgataactgcaacaacagggggcactgtgttaatggg
aagtgcatgtgtgaggagcgatacatgggagacaactgtggagagctgagctgcctcaac
aactgccaggacatgggccgctgtgtgaatggacaatgtctctgtgatgagggatacatc
ggagaagactgctcagaagtttcacctccaaaggacctgactgtaacagaggtcaccacc
gagacagtggatctgacctggaacaacgagatgctggtgacagagtatctgattgcatat
gtgcccactagtcctgggggtctgtaccaggagttcagagtgcccggagacaagactgct
gccacagtcagtgagctggagcctggcatcgagtacctgatcaacgtctatgccatcctc
agcaacaagaagagcatcccaatcagtgccagggtggccacaaatctaccagagccagat
ggcttgaagttcaaatcggtgagggacacctcagtagaggtgttgtgggatcagctggac
attccctttgatgcctgggagctctatgtccgtaacacgaaagaggagaatgggaagatc
ctgacaacccttccatcctcccagactatgtatgagcagtccgggcttggtcctggtcag
gagtacgaggtctcagtgggcatcatcaagaacaataccagaggacctcagtctactaaa
atcattaccaccaggattgatggccccagacaggtagaggtgcgtgacgtgacggactgc
tcaggcttggtcacctggttccagcccgtggcccaggtggacggtgtcactgtgtcctat
ggccccagctcccagcccacagagaggaccagcgtggacctttccacctcagacaaacag
tacagcatcgacagcctcagcccagacactgagtaccaggtgtccctgatctccaggagg
ggagacaccaccagtgagccagtctctgagatattcaccacagacctggacgcccccaag
gacctgcagcccctgggccagacagargacagcgtcacactggagtggagaaacagccgg
gcagatgttgacagctacagggtgaagtacagccccatctctgggggttcccatggcgag
gaggtgttcccccgtgggtcaggagacaacactcaggccaccatcactggaatgaaaccg
ggtacagaatacgggattggtgtgaccgcagtgaagaacgagagggagagcctmcctgcc
actacaaacgcagccaccgatctcgatgggcccaaggacttggaagtgagcgagtccaca
gagacaagcatgaccctggtgtggaygacacccagagccaagatcaccatctacaggctg
gtgtacatctccagggacggtcgaagggaggaggtggaggtccctggaactgccaccacc
tacgtcctgaacaacctgacccccggcatgctgtacaccattaccctggtcgctgagagg
ggctcaaagaagagcacacccgtaaccctgtccgcatctacagaggacctgaggcctgtg
gtggccaacctcacagtctctgacgtgacatgggacagcttcaatgtgtcctggactccc
gaggacggggagtttgagagctttgtcattgaggtgacaaacttacaggaaggtttagag
agcgagaacctcaccttgtctggtgatgccttcagcctgggcatttctggcctgagtcct
aacacctcgtataggattggcctgtacgggctccacaagggctccttccaggagccggtg
tataccgaagtcactacaggcctgggcgctccaaggggcatccgcttctctgaggtgacc
gagtcctcggccatagtccactggaccatgcctcgtgccagagtggacagctaccgcatc
atctatgtgcccctccaaggaggtagcccaatgacagtgctagcggatgggactgagacc
caggccttgctgcctaacatgttgccaggggtgacctaccaggtgaccatattctccacg
aagggcctggaggagagtgacccagggacagacaccatcaccacagctctggacaggcct
cagggtctttctgctgtcaacgtcactgacacgaccgccctgctgctatggcaacccact
cgggccaatgtcgatggctacgtcatcacctacagtgcagattcagtgtccccagtgatg
gagtacgtttctgggaacacagtggagtttgagatgggctctctggtccctgccacccat
tacacagttggggtatacgccatgagggaggcactgaagagtggcaccaccaccaccgaa
ttcaccacagatgtggattctcctcgtgacctggcagccagtaacgtccagacagacagt
gccactctcacttggaagcccccgcgtgccgacatcaccggatacgtcctcaccttcacc
tcatctgacagcacagtccgggaagtggttctgagccctacagccacatcatacagcatg
actcagctgagtgccactaccgactacaacgtcaggctacaggccatkgctggagcccag
cggagccgccacgtcaccaccgtcttcaccaccatcggagtgttgtacagataccctaag
gactgctcacaggctctgctgaatggagacaccacctctggcatctacaccatctacgtg
ggaggagaagagagccagcccatccaggtctactgtgacatgaccaccgacggaggtgga
tggatggtgttcctgaggcgccagagtggaaagctggagttcttcaggaactggaagaat
tacactggtggctttggtgacattaatggtgaattctggtttggtctagccaacctccac
aagatgacaacagcaggccagtacgagctgcgtgtggacctgagggacaacggggagtcg
gcctatgctcagtatgacaagttcacgatcgcagaaccccgtagccgctacaagatccac
ataggagggttcagcggcacagcaggtgactctatgacttatcaccagggccggcccttc
tccacgtatgacaatgacaatgacatcgctgtcaccaactgtgccctgtcctataagggt
gccttctggtacaagaactgccatcgtgtcaaccttatgggaagatatggtgacgatagt
cacagcaagggtatcaactggttccattggaagggacacgagcattcaatacagttcgcc
gaaatgaagattagaccagtcaacttcagaaactttgaaagtcgaaggaaaagatcatag
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integrated database retrieval system
