Salvelinus sp. IW2-2015 (Arctic char): 111963974
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Entry
111963974 CDS
T05762
Name
(RefSeq) serine/arginine-rich splicing factor 3
KO
K12892
serine/arginine-rich splicing factor 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111963974
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111963974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111963974
Spliceosome [BR:
salp03041
]
Common components
Common spliceosomal components
SR proteins
111963974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111963974
NCBI-ProteinID:
XP_023843361
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All DBs
Position
LG1:27950996..27958898
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AA seq
172 aa
AA seq
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MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSISRSRSRSLSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTAERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccctctg
cgtagtgtgtgggtggcgaggaacccaccaggctttgcctttgtcgagtttgaggaccca
agagatgcaactgatgctgtgagagaattggatgggaggactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacctccaccctcctgg
agccgtcgtcctggacgtgatgactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcattagccgcagtcgcagcaggtctctgtctcgagac
cgaagaagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctctaggaccgcggagagaaagtga
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