Salvelinus sp. IW2-2015 (Arctic char): 111964037
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Entry
111964037 CDS
T05762
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111964037 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111964037 (trim32)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111964037 (trim32)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111964037 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
Vgb_lyase
zf-RING_4
Prok-RING_4
zf-RING_11
Haem_bd
ArfGap
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
111964037
NCBI-ProteinID:
XP_023843475
LinkDB
All DBs
Position
LG5:20263884..20268544
Genome browser
AA seq
675 aa
AA seq
DB search
MAAALPALDPDLLREVLECPICLETYNQEQLRPKLLQCGHTVCRQCLEKLLASTINGVRC
PFCSRVSRMSSISQLADNLTVLKILDCASSCTTAGALMCKTCRNRLPRQYCLDCGTVLCD
LCKGEGHQQQGHTVQPIRAVAEQRRKDLGGKLASLREAMDHIQKKRAAIDSLTKNMRVKY
RAVQQEYARAELRLQEELGRQRRAFAASMAEVEKLNSQILEEQTYLLNLAEVQVVSRCDY
LTMQVKQSDIALLEDGGVKDEEELDLRSSLELPTLIKLQDPELVTTEHPEALDVAQLTTK
PCTVNTDEDEGMLEFGVGAMCRAAGAVGDLYRDIDIVMPVDEAVCASPGSFKSKSMDEGG
PSSPGDARVGSGPQHCQFVKKMGCKGNLPGMFNLPVSICVTSQGEVLVADRGNYRIQIFN
RKGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYDNSVKVYTTDG
HCVACHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFV
TCDAAGTVYFTQGLGLNIENRHNEHHLEGGFSIGSVGTDGQLGKQLSHFFSETEDFRCIT
GMCVDANGDLLVTDSGRKEILQFPKEGGFNVLIQEGLTCPVGVAVTQKGQLMVLDCWDHC
VKVYTYLQRRRSSTC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctttgccggctctggacccggacctgctacgggaggtcctggagtgcccc
atctgcctggagacttacaaccaggagcagctgcggcccaagctcttgcagtgtggccac
accgtgtgcagacagtgtctggaaaagctgctggctagcaccattaacggcgtgcgatgc
cccttctgcagcagggtctcccgcatgagcagcatctcccagctggccgacaacctcact
gtgctcaagatcctggactgtgccagctcctgcaccaccgccggcgccctaatgtgcaag
acctgccgcaaccgcctaccccgacagtactgcctagactgtggcacggtgctctgcgac
ctctgcaagggtgagggccaccagcagcagggccacaccgtccagcccatccgggcggtc
gctgagcagcgccggaaggacctgggtggtaagctggcatccctccgcgaagccatggac
cacatccagaaaaagagggcagctattgacagtctgacaaagaacatgcgggtaaagtac
cgggcagtgcagcaggagtacgcccgggctgagctgcgtctgcaggaggagctggggcgc
cagcggcgggccttcgctgcctccatggccgaggtggagaagcttaacagtcagatcctg
gaggagcagacatacctgctgaacctggccgaggtgcaggtggtgtcccgctgcgactac
ctgaccatgcaggtgaagcagagtgacattgcactgttggaggacggaggggtgaaggac
gaggaggagctggacctaaggagcagcctggaactgcctactctgatcaagctccaggac
cctgagctggtgactacggagcaccccgaggccctggacgtggcccagctcaccaccaaa
ccctgcaccgtcaacactgatgaggatgaggggatgctggagtttggggttggtgccatg
tgcagggctgcaggggcggtcggggacctgtacagagacattgatatagtaatgcctgta
gatgaggccgtgtgtgcctcaccgggcagctttaaatccaagtccatggatgaagggggg
ccctcctctcccggtgatgccagggttggctcggggccacagcactgccagtttgtaaaa
aagatgggttgcaagggtaacctgccggggatgttcaacctgccagttagcatctgcgtc
acctcacaaggtgaggtcctggtggctgaccggggcaactaccgcatccagatctttaac
cgcaaaggcttccagagggagatccgccgcaaccccagcagcatcgacaacttcgtcctg
agcttcctgggtgccgacctgcccaacctcatcccgctgtccatcgctatcacgcctcag
ggccttatcggggtcaccgacaactacgacaactcggtcaaggtatacaccaccgacggc
cactgcgtggcctgccacaagaatcagctgatcaagccgtggggcatcgccgccatgccc
tcgggtcaattcgtggtgtctgacgtggagggcggcaagctctggtgcctggcggtggat
cgcaacgtgggtgtggtcaactacaaccgcctatgctcggccgtgcggcccaagttcgtg
acgtgcgacgcagcaggcaccgtctacttcacccaggggttgggcctgaatattgagaac
cgccacaacgagcaccacctagaggggggtttctccatcggctcggtgggcacggatggc
cagctgggcaaacagctcagccacttcttctcggagactgaggacttccgttgcatcacg
ggcatgtgcgtggacgcaaacggggaccttttggtgacagacagcggcaggaaggagatc
ctgcagttccccaaagagggcggcttcaacgtgctcatccaggagggactgacgtgccct
gtgggcgtggccgtcacacagaaaggacagctgatggtgctggactgctgggaccactgt
gtaaaagtctacacgtacctacagaggagacgctcctccacctgctag
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