KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111964140
Entry
111964140         CDS       T05762                                 
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salp03400]
    111964140
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    111964140
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 111964140
NCBI-ProteinID: XP_023843647
LinkDB
Position
LG5:complement(26920776..26929487)
AA seq 1474 aa
MSDENAYTTSGNDTSGVGVEENVVGLKVGCQSPESGLSQTGSSGSSNGKRTRSGGKSSPK
SSNSDDTDAHSSGNDSAEREVEGHMGRETSTCSSFHNGKDSAMETTESKSANSHSPSPPN
SSMVYSLLSGSSEQDHPSTSGCSSDQPAWLQTQRELLKALKELKIRMPADHRAKGRSSTL
ASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSV
GVSFLSGKLVYISPQASPMLRTKPNRLQGTLFSELLAPQDVSTFYSSTAPCRLPPWASCT
GSMTSPVDCTQEKSMFCRISSGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAE
KVHSGYEAPRIPADKRILXTSHTPXCLFQEVDESAVPLLGYLPQDLVGTPVLMYLHPDDR
PVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVR
TSPLNEDVFTPSMEVEVRAMSPEIPRLSEQIHRVLVQPVHSGASQGYCSSHGSQSHRPSP
GSSGSSSPSTKGIIQMTIQRPQQMTFQQMCKDVHMVKTNGQQVFIESRNRPPLRKHASAG
DLVMPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVPNT
VKRKCGSSSCTTSSTSDDDKQRELSGTAKDLEGSQGKEGSKGGPQMSPLALHCKAESVVS
LTSQCSFSSTIVHVGDKKPPESDIIMMEETPPTTTAPAINNAITTAVTPRPSTFPSPATP
SPAQPERDSRRSAGCSGSLGLTKEVLSAHTLQEEQVFLSRFRDLGQLRMLDPGPPLRGHT
TTHKGVHTSKDYPAGGNGRRRGRGAKRLKHQQEGSQHGGCPKTGSGMNRSSRKEGQGNQG
PMFPMGQPLMMQGPLTSSSSWPTSVASLPPAVAQYPPGVLPFFPLYPNVQQQLLAHTGVN
PNAMQLGYPSPQPGFQYPLHANQIPMPMAPPMMVVLPNYMFPQLNGGVPQLNQLNTAMPH
LNPSIPGMAQFNQALPQFNQAIPLPQLNHVLAQFNPAVTQMNGMPLAQHNPSHVNPALQV
NPALSMIPQHFHNPNPTLPFPNPIPVPGLPCFALPRLDPTFVARGNSRSSTPQSTCQSPL
EGTNSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTPPPPGSSSQVGGQGSVNRNSN
MKGDAKEYDNADVDNQDAMSTSSDLLDLLLQEDACSGTGSAASGSGSSGSNGCSTSGSDT
RSSNTSKYFGSIDSSENDHKQAAGGAEEAQLMKYVLQDPIWLLMANTDDKVMMTYQMPTR
DRETVLRQDRMVLRAVQKQQPHFTEEQKRELIQVHPWMGTGRLPQAINNPTCTGCGSPTA
TSAPRPFDVELQDMDLTGVLQLPEEATAHTETHVTMATDTSISPPQAPQTETKGGEAERQ
GEQEGDCKDTRVKELEVTSSSVTEKGDSVAVNGN
NT seq 4425 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaatgacactagtggagtaggtgtagaa
gaaaatgtggtgggactgaaggtgggctgccagtcccctgagtctggactaagtcagact
ggcagctctggtagctccaatggaaagagaactcggtctgggggcaagtcctcccccaag
tcctcaaactccgatgacacagatgcccactcgagtgggaacgactcagccgagagagag
gtggaaggtcacatgggacgtgagacatcaacctgcagcagcttccataacgggaaggac
tctgccatggagacaacagagagcaaaagtgccaactcccacagcccttcccctcccaac
agctctatggtctacagcctgctgagtggcagctcggagcaggaccacccgtccaccagc
ggatgcagcagtgaccagccagcctggctgcagacccagagagagctgctcaaggctctg
aaggagctaaagatccgcatgcctgcagaccaccgggcgaaaggccgctccagcaccctg
gcctccctgcagtatgcactcaactgtgtcaaacaagtccgagcgaatcaggagtattat
caccagtggagtgtggaggagagccacggttgcagtctggacctctctgccttcaccaca
gaggaactggacaacatcacctctgaatacacactccagaacacggacacgttctcagtg
ggagtgtccttcctctctgggaagttggtgtacatctccccccaggcctctcccatgctg
cgcactaagcccaatcgactccaggggacactcttctctgagctgttggcaccccaggac
gttagcactttctacagcagcactgctccctgccgcctgcccccctgggcctcctgtact
ggctccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatcagt
agtgggagggacagtgagggggaagtgcggtactaccccttccgtatgaccccctaccag
ctaaccctacgggactccgacatgtcccaaccacagccctgctgcctgctcatcgctgag
aaggtgcactcaggatacgaagctccccgratcccagcmgacaagaggattttrakcacr
agccacacccccygctgtctctttcaggaagtkgatgaaagygctgtgccgttgctaggc
tacctgccccaggacctggttgggactcctgtcctcatgtacctccaccctgatgacagg
cctgtcatggtggccatacacaagaagattctccagtcagcagggcagccctttgaacac
tcgcccctgcgtatgtgtgctcggaacggggagtatctcaccatagataccagctggtcc
tccttcgtcaacccctggagccgcaaagttgccttcatcgtgggtcgacacaaagtcaga
acgagtcccctgaacgaagatgtgttcacccctagtatggaggtggaggtgcgggctatg
tctccagagatccccaggctcagtgagcagatccaccgtgtgctggtgcagcccgtccac
agtggtgcctcccagggctactgcagctcccacggatcccagtcacacaggcccagcccg
ggctcctcaggcagcagcagcccctccaccaaggggatcatccagatgaccatccagaga
ccacagcagatgacattccagcagatgtgtaaggacgtccacatggtgaagaccaatggt
cagcaggtcttcatcgagtcccgcaaccgcccaccgctccgcaaacacgccagcgctgga
gacctggtgatgccagagaatttaaacaaagacttgggacctattggagctctggggcca
actaaaaccctggcctccgtgcagtcaaggaaagatccgtcagccaactactcctaccag
cagatcaactgtctggacagcatcgtacgctacttggagagctgtaacgtccccaacaca
gtgaagaggaaatgtggctcctcttcctgcaccacatcatcaacgtcagacgatgacaag
cagagggagttgtctggaacagctaaagatctcgaagggtcacagggtaaggaagggtct
aaaggggggccacagatgagccctctggcgctgcactgcaaggctgagagtgtggtctct
ctcacgtcccaatgcagcttcagcagcaccatcgtccatgtaggggacaagaagccccca
gagtcagatattatcatgatggaggagacacctcccaccaccaccgccccagccattaac
aacgccatcaccacggcagtgaccccccgtccctcgacctttcccagcccagcaacaccc
agccctgcccagcctgagagggatagccgcaggtcggctggatgctcaggcagcctgggt
ctgaccaaggaggtgctgtctgcccacaccctgcaggaggaacaggtgttcctgagccgg
ttcagggacctgggacagctccgcatgctggaccccggtcctcctctgagaggacacacc
accacacacaaaggagtgcacacctcgaaggactacccagcaggtggtaacggacggagg
aggggccggggggccaagaggctgaagcaccagcaggagggctcccagcacgggggctgc
cccaagacaggctcagggatgaacagaagttccagaaaggaagggcaggggaaccaaggc
cccatgttccccatgggtcaacccctaatgatgcagggacccctgacctcgtcctcttcc
tggcccacctctgtggccagcctccctcctgccgtggcccagtaccctccaggagtccta
cccttcttccccctctaccccaacgtgcaacaacaactcctggcccacaccggggtgaac
cccaacgccatgcagttgggttaccccagcccccagccaggcttccagtaccccctgcat
gccaatcagatccccatgccaatggctcccccgatgatggttgttctgcccaactacatg
ttccctcaactcaatggaggtgtaccacagctcaaccagctcaatacagccatgcctcac
cttaaccccagtatccctggtatggcacaatttaaccaggcactaccgcagttcaaccag
gctatcccactaccacaactcaatcatgtcttggctcaattcaaccctgctgtgacgcag
atgaatggcatgcctctagctcaacacaacccgtcacacgtcaatcctgcattacaggtc
aatcctgctttgtcgatgatcccacaacattttcacaatcccaacccaacattacctttc
ccaaatcccattccggtgcccgggcttccttgctttgccttacccaggcttgatcccact
tttgtcgcacgtggcaactcccgctccagcacccctcagtccacatgccaatcccccctg
gaagggaccaactcgcccctcttccagtcacgatgctcctcccccctcaacctgctgcag
ctggaggagttgccaggcaacaggcaggagggcatgtcaacaggggcgcagcagacccca
cccccacctggctcgtcgtctcaggtcggaggtcaaggctctgttaaccgcaacagcaac
atgaagggtgatgccaaagagtacgataatgctgatgttgataaccaggacgccatgtcc
acctccagtgacctgctggacctgctgctgcaagaggacgcctgctcaggcaccggctcg
gctgcctctggctccgggtcctctggctctaatggatgcagcacctcagggagtgacaca
agaagcagcaacaccagcaagtactttggcagcattgactcatcggagaacgaccataag
caggcagcaggcggggctgaagaggcccagctcatgaagtatgtccttcaggaccctatc
tggctccttatggccaacacagatgacaaggttatgatgacctaccaaatgcccaccagg
gacagggagactgttctaaggcaagatcgtatggtactgagggcggtacagaaacagcag
ccacacttcactgaggagcagaagagagagctgatccaggtccacccctggatgggcacc
ggtcgcctgccacaggccatcaacaaccctacttgtaccgggtgcggttctcctacagct
acctccgccccccggccctttgatgtggagctgcaggacatggatctgactggggtccta
cagctaccggaagaggctaccgcacacacagagacacatgttacaatggcaacagacact
tccatctctccaccacaagctccccagacagagactaaggggggtgaggctgagaggcaa
ggggagcaggaaggagactgtaaggacaccagagtgaaggagttggaggtaacatcctca
tctgtaacagagaaaggggactctgtggctgtaaatggcaactga

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