Salvelinus sp. IW2-2015 (Arctic char): 111964147
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Entry
111964147 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111964147
04082 Neuroactive ligand signaling
111964147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111964147
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111964147
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
111964147
NCBI-ProteinID:
XP_023843664
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Position
LG5:complement(27079450..27124868)
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AA seq
512 aa
AA seq
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MLGPQEDKLCGIVSALAALSFVCFAQSTSTGQTGISVAKATVDKLLKGYDIRLRPDFGGA
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYAELPLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFYWHGGDTAVTGVDKLELPQFSIVALRLVSREVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKIHERLNKTNNERPRYEEK
RLREQDSIATPFQTNTLRSYTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPN
LADVSTIDKWSRVLFPIMFGFFNLIYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcctcaagaagataaattatgtggaattgtctctgctttggcggctctgtcc
ttcgtttgctttgctcaaagcacctccactggacaaactggaatatctgtggccaaggcc
accgtggacaagttgctgaaggggtatgacatccgtctaaggcctgattttggaggtgcc
ccagtcatcgtaggaatgagcatcaacatcgctagcattgactccatctcagaggtgaac
atggattataccatcacaatgtatttccagcaaagttggcgagacaagcgtttggcatac
gctgagctgcccctcaacctgactctggataaccgcgtggcggaccagctgtggctccca
gacacctacttccttaacgacaagaagtcttttctgcatggcgtgacagtaaagaaccgt
atgattcgactgcatcctgatggcaccgtgttatatggactcagaataaccaccacagca
gcttgcatgatggacttgaggaggtacccgctcgacgaacagaactgcaccctggaaatc
gaaagctatgggtacaccacagatgacattgttttctactggcacggaggtgacactgcg
gtgacgggggtggataagctggagcttcctcagttctccatcgtagcacttcgcctggtg
tccagggaggtcaggtttaccacaggttcctatcccaggctatcgttgagtttcaggatt
aaaaggaacataggctacttcatcctgcagacatacatgccctccatcctgatcaccatc
ctctcctgggtctccttctggatcaactacgatgcctctgcagctcgggtggccctgggt
gttacaacggtgctcaccatgacaaccattaacacccaccttagggagaccctcccaaag
atcccgtacgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctg
gccctgctcgaatatgccttcgtaaactacgtgttctttggccggggcccccagcaacag
aagaaaatccacgagcggctgaacaaaaccaacaacgagcgcccgcgatacgaagagaag
cgcctgagggaacaggactccatcgccacgccgtttcaaaccaacaccctcaggtcatat
acacagagaagaaatctgtacctcgaggagcaaagaaaagttggggtggacgcttatggg
aacatcctgctcaccacattggagatgaataatgaggtgatgccgtcagatgtgggaagt
agtgtcagtgactcccggaattcagtgatgtcattcgacagctccggggtccagttcagg
aagcccatggctccccgcgatggcttcagccaccactcactggaccgcagcgccatgcgc
agcagggccaactgtcggctacgacggcgctcctccaagctcaagctgaaaatccctaat
ctggcagatgtcagcaccattgacaaatggtcccgggtccttttccccatcatgtttgga
tttttcaacctaatctactggttgtactatgtgaattga
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