Salvelinus sp. IW2-2015 (Arctic char): 111964183
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Entry
111964183 CDS
T05762
Name
(RefSeq) steroid hormone receptor ERR1
KO
K08552
estrogen-related receptor alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111964183
03029 Mitochondrial biogenesis [BR:
salp03029
]
111964183
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111964183
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111964183
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111964183
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3B. Estrogen-related receptor
111964183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
111964183
NCBI-ProteinID:
XP_023843726
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Position
LG5:complement(28200907..28213330)
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AA seq
433 aa
AA seq
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MSSRERRSDLYIKAEPSSPEGGGGGRASPGGASSDSSQSGGGGTRGDGVGRYSPPLYTPA
LRCHFKEEGGDGAEEGSTGSGGGRCKYALSTLPKRLCLVCGDVGSGYHYGVASCEACKAF
FKRTIQGNIEYSCPASNECEITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQKYK
RRPEVENATYQSTPLPLRKEGEKGSSNIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLTTL
CDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAFRSLGCEDEVVFAE
DFVLDEEMSRVAGLTELNAAISQLARRFRSLQLDREEFVMLKAIALTNSDSVYIEDMEAV
QKLRDLLHQTLLEMECQRHPEDPQRVGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPMHK
LFLEMLEAMMDSP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagggagcgtcggtcagacctgtacatcaaggcagagcccagcagtccagag
ggaggtggaggaggccgggccagcccagggggagcctcctcagactcctcccagagtggt
ggaggtgggacaagaggagacggggttgggcgctactcaccccctctgtacacaccggcc
ctgcggtgccacttcaaggaggagggtggtgatggggcggaggagggatccacaggtagc
ggaggagggcggtgcaagtatgccctgagcacacttcccaagagactgtgtttagtgtgt
ggagatgtaggatctggctaccactacggtgtagcctcgtgtgaagcctgcaaggccttc
ttcaagagaaccatccagggtaacattgaatatagctgtccggcgtcaaacgaatgtgag
atcaccaagaggcgcagaaaggcttgccaggcgtgccgcttcaccaagtgccttaaagta
ggcatgctaaaagagggagtccgtctggaccgggtcagaggagggagacagaagtataaa
aggcgtccagaggtggagaatgcgacctaccagagtacccctctaccgcttaggaaggaa
ggggaaaaaggctcctccaacatcatcgtgtcccacctcctggtggcagagccagagaaa
ctgtttgccatgcctgaccccctgcagcctgatacggctcagcgcacactcaccaccctc
tgtgacctcgccgaccgcgaactggtcgtcatcatcggctgggccaaacacatccccggc
ttcctgtcgctgtcgctggcagaccagatgtcggtgctgcagtccgtatggttggaggtg
ctggtgctgggtgtggccttccgctccctgggctgtgaggatgaggtagtgttcgctgag
gactttgtccttgacgaggagatgtcccgcgtggctggactgacagagctcaacgcagcc
atcagccagctggcccgacgcttccgctccctgcagctggaccgggaggagtttgtcatg
ctcaaagccatcgcactcaccaactccgactctgtgtacatagaggacatggaggcggtg
cagaagctgagggacctcctccaccagaccctgttggagatggagtgccagcgacatccc
gaggacccccagcgggtggggcgcctcctcctcaccctccccctcctccgccagacagct
ggtcgcgccctcaccaccttctacagcatcaagacccgaggcggcgtgcccatgcacaaa
ctcttcctagagatgctggaagccatgatggactcgccctag
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