Salvelinus sp. IW2-2015 (Arctic char): 111964189
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Entry
111964189 CDS
T05762
Name
(RefSeq) EH domain-containing protein 1
KO
K12483
EH domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111964189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111964189
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111964189
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111964189
Exosome [BR:
salp04147
]
Exosomal proteins
Proteins found in most exosomes
111964189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
Roc
AAA_16
AAA_22
EF-hand_5
EF-hand_6
TsaE
AAA_28
AIG1
PIN_5
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
111964189
NCBI-ProteinID:
XP_023843736
LinkDB
All DBs
Position
LG5:complement(28281325..28312529)
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AA seq
528 aa
AA seq
DB search
MFKRDGKKDPELFQNVSEGLKKLYRTKLFPLEDTYRFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGEQEGLIPGNALVVDPKKPFRKL
NAFGNAFLNRFVCAQMPNAVLESISIIDTPGILSGEKQRLSRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQIGTQQLMRVYGALMWSLGKIVG
TPEVIRVYIGSFWAQPLLVPDNRKLFEAEEQDLFKDIQGLPRNAALRKLNDLIKRARLAK
VHAYIISSLKKEMPNMFGKDNKKKELIANLGEIYTRIEKEHQISPGDFPKLAKMQEILAN
QDFSKFQVVKPKLLEAVEDMLANDIAKLMTLVRQEEAAMPSQSVQGGAFEGTMNGPFGHG
YGEGAGEGIDELEWVVARDKPTYDEIFYTLSPVNGKVSGAMAKKEMVKSKLPNTVLGKIW
KLADVDKDGFLDDEEFSLANHLIKVKLEGHELPTDLPEHLIPPSKRGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagggatggcaagaaggacccagaactattccaaaatgtctctgaagggctg
aaaaaactgtacaggaccaaactctttccattggaagacacctaccgcttccacgatttc
cattcacccgctttggaagatgccgactttgacaacaagcctatggtgctcttggttggc
caatactctacaggtaaaaccacatttatccggcatctaatggagcaagatttccccggc
atgcggatagggcccgaaccgaccaccgactccttcatagcggtcatgcatggagaacag
gaggggctgatcccaggcaacgctctagtagttgaccccaagaaacccttcagaaaactc
aacgcttttggcaacgcttttcttaaccggtttgtgtgtgctcagatgcccaacgctgta
ttggagagcatcagcatcatcgacaccccaggaatcctgtctggagagaagcaaaggctc
agcagaggttatgactttgctgcagtgctggagtggtttgcagaacgcgttgaccgcatc
atcctgctcttcgacgcccacaaactggacatctcagatgaattctctgaggtgatccgc
gccctgaagaaccatgaggacaagatgcgggtggttctgaacaaggctgaccagattggc
acgcagcagctgatgagggtctatggcgccctcatgtggtctcttggtaaaattgttggt
actccagaggtgatccgggtgtatatcggttctttttgggctcagccgctcctggtccca
gacaaccggaagctttttgaggctgaggaacaggaccttttcaaggatattcaggggctg
cctcggaatgctgctctgaggaagctcaatgacctcatcaagcgggctcgcctcgccaag
gtccacgcttacatcatcagctctctaaagaaggagatgcccaatatgtttgggaaggat
aataagaagaaggagctgatcgccaacctgggggagatctacacgaggattgagaaagag
caccagatctcacctggagacttccccaaactagctaagatgcaggagatcttggcaaac
caagacttcagtaagttccaggtggtgaagcccaagctgctggaggccgttgaggacatg
ctagccaacgacatcgccaaactcatgaccctcgtccgccaggaggaggcagccatgccc
agccagtcagtccaaggtggtgccttcgagggcaccatgaatgggcccttcggccatggc
tacggcgagggtgcaggcgagggcattgatgagctggagtgggtggtggcacgagacaaa
cccacctacgatgagatcttctacaccctgtctcctgtcaacggcaaagtgtctggtgcc
atggccaagaaggaaatggtgaagtccaagctgcccaacacagtgctggggaagatctgg
aagctggccgacgtagacaaggacggtttcctggacgacgaagagttttcccttgccaat
cacttgatcaaggtgaagcttgagggtcacgagcttcccactgacctgccagaacacctt
atccccccttccaaaaggggactgtag
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