Salvelinus sp. IW2-2015 (Arctic char): 111964379
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Entry
111964379 CDS
T05762
Name
(RefSeq) cysteine protease ATG4A-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136
Autophagy - other
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111964379
04136 Autophagy - other
111964379
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111964379
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111964379
03029 Mitochondrial biogenesis [BR:
salp03029
]
111964379
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
111964379
Membrane trafficking [BR:
salp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111964379
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111964379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
111964379
NCBI-ProteinID:
XP_023844033
LinkDB
All DBs
Position
LG5:complement(33125931..33137905)
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AA seq
413 aa
AA seq
DB search
MEAVLAKYENQINVFSEFLEDLPDTDEPVWVLGECYNAKTGKTELLSDVHSRLWFTYRKK
FSPIGGTGPSSDAGWGCMLRCGQMILAQALVCSQLGRAWRWRAEGGQPEKYHRILHCFLD
RKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNSLAVYVSMDNTVVIE
DIKKQCRQASSESRLRPRPCGWQEPFTSRETPEQACSHTDGNRATTCPHSQSHSDWRPLL
LVIPLRMGINHINPVYIQALKECFKMPQSCGVLGGKPNLAYYFIGFVGEELIYLDPHTTQ
SAVESEAGSGVDDQSYHCLRSPRRMKITNLDPSVALGFFCKSEDDFDSWCNLVQQEIQMK
RNLRMFELVENHPPHWPPFVPPTKPEVQTTGAEFIESTDKLFESEEEFEILNV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtattagccaagtatgaaaaccagataaacgtgttttcggagttccttgaa
gacttgcctgacacagatgaacctgtgtgggttttaggagagtgttacaatgctaaaaca
ggaaagacggagctactatcagacgtccactcgcggttatggtttacctacaggaagaaa
ttctctcccatagggggaacaggcccctcttcagatgcaggctggggatgcatgctacgc
tgtgggcagatgatccttgcacaggccctggtatgctcacagttgggacgagcctggcgt
tggagggcagagggaggacagccggagaagtaccatcgtatcctccactgtttcctggat
aggaaagacagctgttactccatacaccaaatggctcagatgggagttggtgaaggaaag
tctgtaggagagtggtatggcccaaacacagttgcacaagtgctcaagaaacttgcgcta
tttgatgactggaattctcttgctgtgtatgtgtcaatggacaacaccgtggtgatcgag
gacatcaaaaagcagtgtcgccaggcaagcagtgagagcagattgcggccgagaccctgt
ggctggcaggaacccttcacctctagggaaacaccagaacaagcctgttctcacacggat
gggaacagagccacgacgtgtccacattcccagtctcattctgactggagacccctactg
ctggtcataccactccgcatgggaatcaaccacatcaaccctgtatacatccaggccctc
aaggagtgttttaaaatgccacagtcctgcggtgtgctgggaggaaagcccaatctggcc
tattacttcatcggctttgtaggagaggagctgatctacctggacccccacaccacccag
tcagccgtggagtcagaggctggcagtggagtggacgaccagagctaccactgtctgagg
agcccacgtcgcatgaagatcaccaacctggacccctctgtggccctgggatttttttgt
aagagtgaagatgactttgacagttggtgtaacctggtccagcaggagatccagatgaag
aggaacctgaggatgtttgagctggtggagaatcacccgccccactggccccccttcgtt
cctcccaccaaaccagaggtccagaccacaggggcagagttcatcgaatcaaccgacaag
ctgtttgagtctgaagaggagtttgagatcctcaacgtgtga
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