Salvelinus sp. IW2-2015 (Arctic char): 111964399
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Entry
111964399 CDS
T05762
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1 isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111964399
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111964399
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111964399
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111964399
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111964399
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111964399
CD molecules [BR:
salp04090
]
Proteins
111964399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
I-set
ig
Ig_5
C2-set_3
Ig_4
C2-set_2
bL9m_N
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
111964399
NCBI-ProteinID:
XP_023844062
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Position
LG5:33933559..33943979
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AA seq
975 aa
AA seq
DB search
MLFLALFLGIMLCTAQERSPPVIKLNSVLLWETERTLPLGTSFTLTCEGDSTATWSTTAF
KKRNTKQGSMISTRHLTADYTGTYKCVYDNQPDLFSEVHIYVKDPINVLVTPRNMKDVKE
GGDVLLCQLTDPSATDLSLRMANGDPTPPDMNYTVNPRRGILIRHLLTSHSANYICSAKI
NGVTTRSKDININVIQRLRWPPSVLIEVDGYVSIVGEELLIPCITSNPNHFYNVTWKHSS
LKALNFLQKVKQDKQIHITSTVTIPAVTMSDTGNFTCTAVNEAGANRSTTYLQVVDEPYI
RFIPRLSPNLYQNGSLVNVKEGENLEISILIEAYPQIKERWWDVPMSHSHNISTHGDTWT
AQDNYRYESSLLLHRVRSEERGLYTLHTRSTRLDSSITFNIQVYQKPSAMLRLKNSTTLI
CTSSGYPAPTILWYQCPGIQSTCDADNDTVEVQPLFTSTMEVQSELTLSPSTEEVTVECV
TFNFAGKNRVTFVSHVLAATPTFVMSELFTPTLIGATSTAALLFLLLVIVLYKYKQKPKY
EVRWKIIEANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEATAYGLGT
DDNRTTRVAVKMLKPASAHSEEREALMSELKILSHLGCHDNIVNLLGACTQGGPMLMITE
YCSHGDLLNFLRGKAKLFLDSILSGPGVPEVPGDSDHYKNTCSQESRVRRPLCVCSDSGI
SCSSADNYQDMHPAQRPKYCPMGSLCEDPETDTWSLDIEDLLRVSYQVAQGMDFLASKNC
IHRDVAARNVLLTDGHVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFDCVYTV
QSDVWSYGILLWEVFSLGKSPYPNIVVDTRFYKMIKDGCHMSQPDFAPPEIYTIMKMCWN
MEPTVRPTFSTIGQLIQSLLPDQPDQTYRNVQDKTPQQEAGEQSDQAKISEDCDQTLNHE
EEEKPLMRNNNYQFC
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctagcccttttcctgggcatcatgctctgcacagcccaagagcgaagtcct
ccagtgatcaagctgaactctgtgttgctgtgggagactgagaggactttgcctttagga
acgtcgttcaccttgacctgtgagggggacagtacagccacctggtctaccacagcgttc
aaaaagaggaacactaaacaggggagtatgatttccaccaggcaccttacagcagactac
actggcacatacaagtgtgtgtatgacaaccaaccagacctgttctcagaggtccacatc
tatgtgaaagatcccattaatgttctggtaaccccccgcaacatgaaagatgttaaggag
ggcggggatgttctcctctgtcagctgacagaccccagtgccacagacctgtccctccgt
atggccaacggagacccaacaccccctgacatgaactacactgtcaatcccaggagaggg
atcctcatcagacaccttctgaccagccacagtgcaaactacatctgcagcgcaaagatc
aatggggtcacaacacgctccaaagacatcaacatcaatgtcattcaaaggttgcgttgg
ccaccgtctgtgttaattgaggtagatgggtatgtgagtattgtgggagaggagctcctc
atcccctgcatcaccagtaaccctaaccacttctacaacgtcacctggaaacactcctcc
ctcaaagcattgaacttcttacaaaaagtaaagcaggacaagcagatccacatcaccagt
actgtgactatcccggctgtgaccatgtctgacacaggaaacttcacctgtacagccgtg
aatgaggctggggccaacaggtccaccacctacctgcaggtcgtagacgagccttacatt
aggttcataccccgcctgtcacccaatctataccaaaatggctccttagtcaatgtgaaa
gaaggggagaaccttgagataagcattctgatcgaggcctatccccaaatcaaggagcgt
tggtgggacgtgcccatgtctcacagtcacaacatctccactcatggcgacacatggacc
gcccaagacaattacaggtacgagagcagcctgctgctacacagagtcaggtctgaggag
aggggcctgtacaccctccacaccaggagcacgcgcctcgacagctccatcaccttcaat
atccaagtctaccagaaacccagtgccatgctcagactgaagaattctaccaccctgatc
tgcacctcctctggatacccagctcccacaatcctctggtaccagtgcccaggaatacaa
agcacgtgtgatgcggacaatgacaccgtggaggtgcagcctctcttcaccagcaccatg
gaggtgcagagtgagctgaccctcagtccctcaactgaggaggtcacagtggagtgtgtc
acctttaactttgctggcaaaaatcgggtcaccttcgtatcgcatgttcttgctgccact
ccaacatttgtaatgtccgagctgttcacccccactctcattggagccaccagcacagca
gcccttctgttcctactgcttgtcatcgttctgtacaaatacaagcagaaacccaaatat
gaagtccggtggaagatcatcgaggccaatgatgggaataactacacctttattgaccct
actcaacttccttataacaagaagtgggagttccctcgtgataagctgaggcttggccag
attctgggagcaggggcttttgggaaagttgtggaggccactgcctatggtctggggacc
gatgacaacaggactacccgtgtggcagtaaagatgctcaagccagcaagtgcccactca
gaggagagagaagctctgatgtcagaactgaagatcctcagtcacctgggatgtcatgac
aacattgttaacctgttgggggcgtgtactcaaggaggcccaatgctgatgatcacagag
tactgtagccatggcgacctgctgaacttcctgcgtggcaaggccaagctgttcctggac
tccatcctgagtggaccaggggttccagaggttccaggggatagtgatcactacaagaac
acatgtagccaggagtctcgtgtcaggaggcctttatgtgtctgcagtgacagtgggatt
tcctgctccagcgcagacaactaccaggacatgcatccagcgcagaggcccaaatactgc
cctatgggttctttatgtgaggatccagagacagacacctggtcgctggacatagaagac
ttgttgagggtctcctatcaggtggctcagggaatggacttccttgcatccaaaaactgc
attcacagggacgtggccgctaggaacgtcctattgaccgatggccacgtggctaagatc
tgcgactttgggctcgctcgagacatcgagaatgactccaactatgtggtgaaaggaaat
gcccgtctgccagtgaagtggatggcccccgagagcatctttgactgtgtgtacacagtg
cagagtgatgtctggtcctatgggatactgctgtgggaggtcttctctctgggtaagagc
ccataccctaatattgtggtggacacccggttttacaagatgatcaaagatggatgccac
atgtcacagccggactttgcccctccagagatatacaccatcatgaagatgtgttggaac
atggaaccaacagtgcgtccaaccttcagtaccattggccagcttatccagagtctactg
cctgaccagccagaccagacctacaggaatgtgcaggacaagacgccacagcaggaggca
ggagagcagagtgaccaagctaagattagtgaggattgtgatcagacactgaaccatgaa
gaagaggaaaagcccctgatgaggaataacaactaccagttctgctga
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