Salvelinus sp. IW2-2015 (Arctic char): 111964512
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Entry
111964512 CDS
T05762
Name
(RefSeq) nodal homolog 2-A-like
KO
K04666
nodal
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111964512
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111964512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111964512
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111964512
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
MRP-S32
Motif
Other DBs
NCBI-GeneID:
111964512
NCBI-ProteinID:
XP_023844167
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Position
LG5:complement(17018951..17021049)
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AA seq
417 aa
AA seq
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MEGLTLAFFLALLVGSICVVGAENFPGNREAFFHGIRRFPPPSGGHRHPVRHSNRFPLYM
MQLYRTLLEGDTARMPTVSAAQTNNDDNPRLHDSDYVLSLVAKSCHQIGGRWSVTFDMSS
ISASDKVQRSELRIRLPAFSASERVTVDMYHSQTCSYSSPPCPKEDLFLGHLKAEPSSLT
STSNWRVFNITALLHYYWLHQRGSAPGQEVSRPLEREEEEGQEKVLHPTADRVMVVVFSK
HQAEKRAPTLIHTAEHSKYVTLDWERARAGANPPVSIEVEGGKGTGRRKRHGHHQRAGVA
GVAPGVAPTEERKDPLCRKVDMWVDFDQIGWNEWIVYPKRYNAYRCEGSCPTPVDETFTP
TNHAYMQSLLKLHHPDRVPCPFCVPTRLAPLSMLYYENSEVETRHFEGMVVEECGCH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactcactctggctttctttttggcgcttctggtgggctcgatctgtgtggtt
ggagcagagaatttcccagggaaccgtgaggctttcttccacgggattcgtaggtttccc
ccaccaagcggaggtcacaggcaccctgttcgtcactccaacaggttcccactctacatg
atgcagctctaccggactctactcgagggagacaccgccaggatgccaactgttagcgcc
gcccagaccaacaacgatgacaacccccgccttcacgactctgactacgtactcagtctg
gttgccaaaagttgtcaccagatcggtgggaggtggtctgtcacctttgacatgtcctcc
atctctgcaagtgacaaggtccagcgctccgagctgcggatccgcctgcctgcattctct
gcctctgagcgtgtcactgtggacatgtaccactcccagacatgctcctactccagcccg
ccatgcccaaaggaggacctcttcctgggccacctgaaggcagagccaagctctctgacc
tccacatccaactggagggtgttcaacatcaccgccctgctccactactactggctgcac
cagagaggctccgcacctggccaggaagtgagcaggccattagagagagaggaggaggag
ggccaggagaaggtcctgcaccccacagctgaccgggtcatggtggtggtcttctccaag
caccaggcagagaagcgggctcccaccctcatccacaccgctgagcactccaagtacgtc
actctggactgggagcgagctagagctggggccaaccctcctgtcagcatagaggtagag
ggcggaaaaggaacaggtcgcaggaaaaggcacgggcaccaccagagagcaggagtggct
ggggtggcccctggtgtggcccccacggaggagaggaaggacccgttgtgcaggaaggtg
gacatgtgggtggactttgaccagattggctggaacgagtggattgtttaccccaagcgc
tacaacgcctaccgctgtgagggcagctgccctaccccagtagacgagaccttcaccccc
accaaccatgcttacatgcagagtctgctgaaacttcaccacccagacagggtcccatgc
ccgttctgtgtgcccacccgcctggcccctctgtccatgctgtactacgagaacagcgag
gtggagacacggcactttgagggcatggtggtggaggagtgtggttgccattga
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