Salvelinus sp. IW2-2015 (Arctic char): 111964805
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Entry
111964805 CDS
T05762
Symbol
cldn12
Name
(RefSeq) claudin-12
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecule (CAM) interaction
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111964805 (cldn12)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111964805 (cldn12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111964805 (cldn12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111964805 (cldn12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111964805 (cldn12)
04147 Exosome [BR:
salp04147
]
111964805 (cldn12)
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111964805 (cldn12)
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111964805 (cldn12)
Exosomal proteins of colorectal cancer cells
111964805 (cldn12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
111964805
NCBI-ProteinID:
XP_023844366
LinkDB
All DBs
Position
LG6.1:complement(122290..125915)
Genome browser
AA seq
338 aa
AA seq
DB search
MSCRDIHATNAFSFIIAFICVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVK
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAET
DIKSTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIKYDRIFSDGFAVYVA
IGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSTQPLTANGYPPSPVYGPPQT
FPPQGYVPTVMDAQPYAPSQGYPQSXAPLAQQVYMSQMSAPDGYGSEVGQNQAYSYAPSQ
SYAPSQVGYAPSYVGHRYSTRSRMSGIEIDIPVLTQGL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgycgggacatccacgccaccaatgccttctccttcatcatcgccttcatctgc
gtgggcggcatcgctgtggcggcgctgatcccacagtggcgagtgacacgacttgtcacc
ttcaacaaaaacgccaagaacatcagcgtctatgacggcctgtgggccaagtgtgtgaaa
caagatggctactctggctgctactactacgactcagagtggtattctaaagtggaccag
ttggacctgagactgctccagttctgcctgccgactgggctactgtttggctccctggcc
ctggtgctgtgtatggcaggcatgtctaagacctgctgctgctctgataaggctgagaca
gacatcaagagtacccgctgtctggtcaacagcgcaggctgccacctagtggccgggatg
ttcctgttcctgggcggtgctatcgccctggcgccctccgtgtggttcctgttccggacc
aaagagatgaacatcaagtacgaccgcatcttctcagacgggttcgcggtctacgtggcc
atcggctgttccggtggcctcatgctcgccgccctgctgatgttcatgtggtactgcatg
tgtaagaagctaccctctcccttctggctgcctctacccacactccctaactccctctcc
acccagcccctcacagccaacgggtaccccccctcccccgtctacggaccccctcagacc
ttccctccacaggggtaygtccccactgtgatggatgcccagccctacgctccctcccag
ggctaccctcagagcrtagccccactggcccagcaggtctatatgtcccagatgtcagcc
ccagatgggtatgggtcagaggtggggcagaaccaggcttacagctatgccccgtcccag
agttatgccccctctcaggtgggctacgcccccagctacgtaggccaccgctactccaca
cgctcacgcatgtctggcatagagatagacatccctgttctaacacaaggcctctga
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