Salvelinus sp. IW2-2015 (Arctic char): 111964867
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Entry
111964867 CDS
T05762
Name
(RefSeq) GTPase-activating protein GYP7-like isoform X1
KO
K20168
TBC1 domain family member 15
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111964867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111964867
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111964867
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
ADK
Motif
Other DBs
NCBI-GeneID:
111964867
NCBI-ProteinID:
XP_023844470
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All DBs
Position
LG6.1:2049976..2059041
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AA seq
489 aa
AA seq
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MDTLQENGLQHSPALDIPGRESTAKELGVHGTPLIKTKGKHGTTKRSSPVNNVTAEFGNQ
QKVSLVNAPALPTTPLELPGVMDAEGRVDESRLRMHIFKNGGVSPSGRGQVWRFLFGMYP
CSSTSLERPLLQEQLNVRYHSMKRKWQQLFPAAVRLRINGTDAELVAAVRYFDVRQDRVQ
LQAQNQSDEVKERLSFLELQAQVLFERVTFDLEELQEAIRIIDKDVPRTDRDLPYYSGEG
LGNLLVLRXILITYAAFHPEVSYAQGMNDLCSRFLEVLDSEVDTYWSFSCYMEKFSKDFR
ADGLHRKIELEAALLKELDPQLHTHLITDSMESFTFCHRWLLLGFQREFEHCDALRLFEI
LSCDHLELISQQVDRARYQERIARRQSIEDKPVSEAQAVNTEFTFELFICATILLNNRDA
LLRCRNDVQLIQFTNSLQGTLDLNLTLKKAEEHFYNYCKRSAWDYMNGRCRTSKNKEGHF
LFQLRSFFS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacactctacaggagaacgggctacagcactcacctgcacttgatattcccggtcgt
gaaagtaccgccaaagaactcggagtacatgggactccccttattaaaacaaagggaaag
catgggacaacgaaaagaagttcacctgtcaataatgtcacggcggagtttgggaaccaa
cagaaagtatcattggtaaacgcacctgctctacccacgacacctctcgagttacctggc
gttatggacgcagaggggagagtggacgagtccaggctgcggatgcacattttcaagaat
ggtggtgtgtccccttcggggcgtggccaggtgtggcgtttcctgttcgggatgtacccc
tgcagctccacctctctggagcgccccctactgcaggagcagctcaacgtccgctaccac
tccatgaagaggaagtggcagcagctttttcctgccgccgtccgactgcgtataaatggc
accgatgctgagttggtggcagcggtgcggtacttcgatgtgaggcaggacagggtccag
ctgcaggctcagaaccagagtgacgaggtcaaggagaggctgtccttcctggagctacag
gcccaggtgttgtttgagcgggtgacctttgatctggaggagctccaagaggccatccga
atcatcgacaaggacgtgcctcggacagacagagacctaccctactactccggtgaaggc
ttgggcaatctgctggtgttgagggawattctcatcacatatgctgcttttcacccagag
gtgagctatgctcaggggatgaatgacctttgtagccgattcctggaggtgctggactct
gaggtggacacctactggagcttctcctgctacatggagaagttctccaaggacttccgc
gctgacggcctgcacaggaagatagagctggaggcagcactgctgaaggagttggatcct
cagctccacacccacctgatcacagatagcatggagagtttcaccttctgtcacagatgg
ctgctgctgggtttccaaagggagtttgagcactgtgacgccctgcgtctctttgagatc
ctgagctgtgaccacctggagctcatctcccagcaggtggaccgcgcccgctaccaggag
aggatcgcccgcaggcagagtatagaggataaaccagtgtctgaggcacaggccgtcaac
acagaattcacctttgaactcttcatctgtgccaccatattattgaacaacagagatgcc
ctgctgaggtgtaggaacgatgtgcagctcatccagttcaccaacagtttgcagggcact
ctggacctgaacctcaccctgaagaaagcagaggagcatttctacaactactgtaagcgc
tctgcttgggactatatgaacggccgctgcagaacaagtaaaaacaaggagggacacttc
ttgttccagctccgcagcttcttctcctga
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