Salvelinus sp. IW2-2015 (Arctic char): 111964963
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Entry
111964963 CDS
T05762
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111964963
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111964963
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111964963
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
111964963
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111964963
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111964963
Prokaryotic type
111964963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
Val_tRNA-synt_C
GST_C_3
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
111964963
NCBI-ProteinID:
XP_023844629
LinkDB
All DBs
Position
LG6.1:7415522..7429106
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AA seq
1273 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRPCTLIEDPPASLALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKLQQS
SHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNVTRW
FLTCVNQPQFVKVLGQISLCEKMVPVTPKPSVAPVPAANANPTADANGKPKTEAQLKKEA
KNREKLEKFQKKKEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPPGEKKDVLSP
LPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGSLHLGHA
LTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGRDQFIQE
VWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFICLHEDGVIYRSKRLV
NWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEVIVATTR
IETMLGDSAVAVHPADPRYQHLKGKRVLHPFCDRKMPIVFDEFVDVNFGTGAVKITPAHD
HNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGHFKETKDNP
MVVPVCSRSKDIVEPMLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFNWLDNIR
DWCISRQLWWGHRIPAYFVTVTDPSVTPGEDMDGHYWVSGRTEEEARDKAAKRFNVSNDK
ITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLSVFYPGSLLETGHDILFFWVARMVMMG
LKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQDSNLDPV
EVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCNKLWNAV
KFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCTAVGLCNAGFQAYDFPAITTAIYNF
WLYELCDVYLESVKPVFSRAEEDSGSQSQAVVCRQTLFTCLETGLXLLAPIMPFVGEELY
QRLPRRRPQDGHPSIHVMPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADYNLTKTR
ADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRCTVHLML
KGLIDLEKEVAKLTVKKGELEKQMDKLREKMDKSDYKEKVPVKVQELDTEKLRQSQTELE
KATEAIDNFKRMV
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccacaccctgacgacttcaggagcctcatggccctggtt
gctgcagagttctgcccctctcggccctgcacactcatagaggaccctcctgcctccctg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgttgggggtgatgggagtggataagaagcttcagcagagt
tctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggagcctagaaca
ttcctggtgggagacagcctcactctggccgacatcgctgtggcaaccgcagcactcctg
cccttcaaatacgccttggagccatccaacaggaaagccctcacgaacgtgacaaggtgg
tttctgacctgtgtcaaccagcctcagtttgtcaaggtcctgggacagatctctctgtgt
gagaagatggtgcccgtcacacccaaacccagtgttgctcctgttcctgctgctaacgct
aatccaactgctgatgccaatggcaaaccaaagacagaagctcagctgaagaaggaggct
aaaaacagagagaagctggagaagttccaaaagaagaaggagatggaggagaagaaaaag
caagaaaagaaactggcacccccgacagagaaaaaggccaaaccagagaagaaggacctg
ggagtgatctcatacgacgtcccracccctcctggagagaaaaaagacgtcctgagcccc
ctgccagactcgtacagtcctcagtacgtggaggcagcctggtactcctggtgggagaag
cagggttacttcaagcctgagtacgggcggaagagtatcagtgagccgaatccccgtgga
gtgttcatgatgtgtatccctccgcccaatgtgacgggatctcttcacttaggccatgcc
ctaaccaatgccatccaggactgtctgaccagatggcaccgtatgcgtggcgagacgacc
ctgtggaacccaggctgtgaccacgcgggtatcgccacccaggtggtggtggagaaaaaa
ctgatgagggagaggggcatgagccgtcacgacctggggagagaccagttcatccaggag
gtctggaagtggaagaacgagaagggagaccgtatttaccaccagctgaagaagctgggt
tcctctctggactgggacagagcctgcttcaccatggaccctaaactgtcctatgcagtc
caggaggcgttcatttgtctgcatgaggacggcgtgatctacaggagcaagaggctggtc
aactggtcctgcaccctcaactctgccatctcggatatagaggtggataagaaggagctg
actggcaggactctgctgcccgtgcctggatacaaggacaaggtggagtttggagtactg
gtctccttctcctacaagatagagggatcagatgaggaggtgattgtggcgaccactcgt
atagagaccatgctgggagattctgctgtggccgttcaccctgccgaccccagataccag
caccttaaagggaagagggtgcttcatcccttctgtgacaggaagatgcccatcgtgttt
gatgagtttgtggacgtcaactttggaacgggtgctgtgaagatcaccccagcccatgac
cataatgattatgaggttggaaacagacacaacctggccttcatcaacatcctggatgag
aacggcctgctcatcaacgtgccggctccattcctgggtatgaaacgtttcgaagcgagg
aaggctgtgctgcaggctctgaaggacagaggccatttcaaggagaccaaagacaacccc
atggtggtgcctgtctgcagtcgttctaaggacatagtggagcccatgctgaagcctcag
tggtatgtggactgtgctgacatgggcaagcaggcagctgactcggtccgggagggaaga
ctcaaaatcatcccagaccaccaccataagacctggttcaactggttggacaacatcagg
gattggtgtatctctcgtcagctgtggtggggtcacaggatcccagcctactttgtcacc
gtgaccgacccttcagtcacaccaggagaggacatggatggtcattactgggtgagtggg
aggacagaggaggaggccagagataaagctgccaagcgcttcaacgtctccaatgacaag
atcaccctcagacaggatgaggatgtcctggatacatggttctcctctggtattttcccc
ttctccatcttcggctggcccaatgagacccaggacctgagtgtgttctatccaggcagc
ctgctggagacaggtcatgacatcctgttcttctgggtggcccgcatggtgatgatgggc
ctcaaactcactggcaagctgcccttcaaagaggtgtacctccatgcggtggtgagagac
gcccacgggaggaagatgagcaaatctctggggaacgtcatcgaccctctggatgtcatc
acaggcatctctctggagggtctgtatgcccagctgcaggacagtaacctggacccagta
gaggttgagaaggccaagcagggacagaagtcggactaccccactggtatcccagagtgt
ggcacagatgccctccgcttcgccctgtgtgcctacaccagccaaggcagggacattaac
atggatgtgaatcgtatccttggttaccgtcacttctgtaacaagctgtggaatgctgtg
aagtttgccatgaggacyctgggagacaactttgttccttcagagaaagcccagctgtgt
ggggaggagagtgtgtcagaccggtggattctatcccgtctgtgtactgctgtgggtctg
tgtaatgcagggttccaggcctacgacttcccagctatcaccacagccatctacaacttc
tggctctacgagctctgtgacgtctatctggagagtgtgaagccagtgttctccagggcg
gaagaagacagtgggtctcagagccaggctgtagtctgcagacagactctgttcacctgc
ctggagaccggcctgrgcctcctagctcccatcatgcccttcgtgggcgaggagctctac
cagaggttgccacggcgacgaccccaggatggccaccctagtatccatgtcatgccctac
cctgagactgaagagttctgctggcacagtgaggatgtggaccgtcagatggagtttgtg
atgaccgtggtccgyaccatccgttcactcagggccgactacaacctgaccaagacacgt
gccgattgctacctccagtgtatagacagtgagacgatgtctctggtggagcagtacagt
ctgcagatccagaccctgtctctttcccagaccatccagcctgtcccagccaccggggcc
gtcccagagggctgtgctgtggccattgcctccgacaggtgcaccgtccacctcatgctc
aaaggtctgatagacttggagaaggaggtggccaagctgactgtgaagaagggagagttg
gagaaacagatggataaactgagagaaaagatggataagagtgactacaaagagaaggtg
cctgttaaagtacaggagctggacactgagaagctgcgtcagagccagacggagctggag
aaagcaacggaagccatagacaacttcaagagaatggtgtaa
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