Salvelinus sp. IW2-2015 (Arctic char): 111965090
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Entry
111965090 CDS
T05762
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965090
03029 Mitochondrial biogenesis [BR:
salp03029
]
111965090
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111965090
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
111965090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Ank_KRIT1
Borrelia_P83
ANK_LRRK2
GrpE
Motif
Other DBs
NCBI-GeneID:
111965090
NCBI-ProteinID:
XP_023844854
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Position
LG6.1:12097662..12103051
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AA seq
479 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSQSGADINAKDMLKMTALHWAAQHGHREV
AELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGV
VNLSDLVNTTAKSGMGNWSTGYRESVSTTSVLATLAALAEASGPMGNNAGKSEDAIAADS
VDSAIQHVVGDGGQRVITLVTDQHGNLQPAGIGQQFFVTMQGQQMVAVPAGQITEEVVEQ
EPYPSPARKRRIEPAAILTRPKEKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQE
AEQYRLRLEEAIEQQQSNNTSNATGSTSTGVQEVEEEVVQIEKQCETEERVVEEDKVEGE
EDVPFPEDTILVKVEEELDSGEGEQITVDETEETEKASTKVTTIPKRGRGRGRGRGRRR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctggggaagcggctgctggaggctgcaagggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacatcc
ccgctccatctagcggctcagtacggacaccactccactgctgaggtgcttcttcgagca
ggcgttagcagggatgcccggaccaaagtggacaggaccccactccacatggcggccacg
gagggccactccaatatagtggagctgctagtcagtcagagcggagcggacatcaacgct
aaggacatgctgaagatgacagccctgcactgggcggcccagcacggtcacagagaggtg
gcagagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacg
ccctttgacatcgccatggacaccagcaatactgagctcatgatactgttacaggatggc
atgcagaaccaagtgaacatgaacccagagccccagttcatcatctcctctgctggggtc
gtgaacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcaca
ggttacagagaatctgtctctaccacctcagtcctggcaacactggcagccctggcagaa
gcctccggtcccatgggtaacaatgcaggcaaatctgaggatgcgatcgctgcagattct
gtggactcggccattcagcatgtagtgggcgatggaggtcagagggtcatcaccctagtg
acggaccaacacggcaacctgcagccagcaggaattggacagcagttctttgtcactatg
caggggcagcaaatggtggcagtcccggctggtcagatcacagaggaggtggtggaacag
gagccttatccctctccggcacgcaagaggagaatagagcctgcagccatcctaaccaga
cccaaagaaaagaaagcgaagtcaggggacagcagtcgggagcagctccagaagcagttg
caggaggccaaccggaaggcccaggagtaccgcacacagctcctacagaaggagcaggaa
gctgagcagtaccgcctccgactagaggaggccatagagcaacaacagagcaacaatacc
agcaatgctactggttctaccagcacaggtgtccaggaggtagaggaggaggtggtccaa
atagaaaaacaatgtgagacagaggagagagttgtagaggaagacaaagtggaaggggag
gaggacgtcccatttccggaagacaccattctggttaaagtggaggaggaactggattca
ggggagggagaacagataacagtggatgagaccgaggaaacggagaaggcttcaactaag
gtcacaacaatccccaaacgggggagagggaggggacgaggacgtggaaggaggcggtag
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