Salvelinus sp. IW2-2015 (Arctic char): 111965092
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Entry
111965092 CDS
T05762
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
111965092
NCBI-ProteinID:
XP_023844860
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Position
LG6.1:complement(12135985..12258399)
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AA seq
1106 aa
AA seq
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MRLVPGSPRPLPLLAVVLALALTALLPXLAMTVTPFPQDLEPISIGGREHSYLYPSFQGL
MSDNDTXRLGLDFQRMLRINHMLYIAARDHVFAVSLSDSSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPXFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINLRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESAWTPVPEEQVPKPRPGCCASDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTQLNASFSTQLLED
IDVYNPTKCNVRGEDRRVLGLELDREHHALFVAFSSCVVRVPLSRCNDYGSCKKSCLSSR
DPYCVWQRTGSCVTVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQSTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVPVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGXKTKRLAKDPEAPIPHALSLRS
LAKLNGLLXXQNKEDKMEVSSPKLYNSFFQNGKEHXQGAPRRNGGHHPGMSMGDQVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRPSSGQLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANASKNAQVMTSSGLSASGGCHGGQLAFANRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGDQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcggtggtcctggctcta
gccctcacagcactcttacctcamctggccatgacagtcacacccttcccccaggacctg
gagccaatcagcattggggggagagaacactcctacctgtacccaagcttccagggcctc
atgtcggacaacgatacagyacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctgtcagtctcagcgactcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggtcccacgcaac
gacgagacgctatttgcctgcggtaccaacgcctttaaccccacctgccgcaactacaag
atgtctacactggaacaggacggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctctttgctggtggcgatttctactcggccactatgaca
gacttcctggcgagtgatgcggtaatttaccgtagtctgggagagagcagcccagtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctmatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggt
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatctc
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcagcagta
tgtgcattctacatggacgacattgagaaggctttcaacgggaagttcaaggagcagagg
aacagtgagtcagcctggacacccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccagcgacggctctgccgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggacgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tctgctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctgaagatcctggccagcacccagctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaatgtccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacgctctgtttgtggccttctccagctgtgtggtccga
gtacctctgagccgctgcaacgactacggctcctgcaagaagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggactgggagctgtgttacggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagacagctgccacgac
gtcctggcgaccacacgcaagcaaagcactcttgctgattcagcatatgggaagaccaca
cccacaacaacygccagcacaaccaatcaggtggccccattccctaaggtggcaggtgac
tctgaaagaggtacaggtcctgatggcggtcctccagtcccagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacaccggcmacaag
acyaagaggctggccaaggacccrgaggcccccatycctcacgccctgtccctwcgcagc
ctggccaagctcaatggcctgctggamwgccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcrtcaaggagcaccc
agacggaacggtggtcaccacccagggatgtccatgggagaccaggtccacccccatcac
ctacaccactcttcggagctctcgggtctgcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaagagcccaagtcccacaacatgggacaaggctccaggcccagctcaggccagctccac
cagcagatctacccctactctcatagtttctccaatgggcaagctctggccaatgggcat
gccttggtcggtggacctcagcacctggaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctacccacagaaggtgatggaggtcacgtcgctggat
gagctgctcaaacacatccacgaggccaacgccagcaagaacgcccaggtcatgacctca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcctttgccaaccgtgtc
cagccgcacatcccagagaccgagtcggcgccttactacagctcatccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggagacactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccgccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacacgccagcagagctacaacggagat
caacaggaggataccggaggatacctccaccggggggccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccctgcatcctctcccgtcaaccaa
cagggaaacttcaactactga
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