Salvelinus sp. IW2-2015 (Arctic char): 111965105
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Entry
111965105 CDS
T05762
Name
(RefSeq) aggrecan core protein
KO
K06795
brevican
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111965105
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111965105
04091 Lectins [BR:
salp04091
]
111965105
Proteoglycans [BR:
salp00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
111965105
Glycosaminoglycan binding proteins [BR:
salp00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111965105
Lectins [BR:
salp04091
]
C-Type lectins
Lecticans
111965105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
V-set
ig
Motif
Other DBs
NCBI-GeneID:
111965105
NCBI-ProteinID:
XP_023844875
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Position
LG6.1:12658282..12670077
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AA seq
1130 aa
AA seq
DB search
MRLEMLLSLLLCVICPLVLPSSSTPSQASDDSRLLQVTIPTTPPLSAVLGGSLTLPCLVS
LSHPPPNTNGRHAVLSLPRVKWSVLSQGHETEILVARGDRVKVSEAYRDRASLLHYASSP
ADLTLRLDGLQYNDSGFYRCEVQQGLEDADGVAQVKVKGVVFHYRDASSRYAFTFAQARD
ACEEIGAHIATPEQLLAAYHSGYEQCDAGWLSDHSVRYPIQMPREGCFGDMDGHPGVRNY
GLLEPDELYDVYCYVENIEGEVFHGSAPRSFTLWEAKAYCLAQGAELATTGQLYAAWNDG
LNACSPGWLADGSVRYPIVTPRERCGGGEPGVRTVYRHLNQTGFPEAHTRHDTYCFRGNS
NTHTESPHDYLATEPEDIGQDIVTLFEPLEEFSQVTEQVVSEEAQGSLTTLPIPEEQHPS
EHIEEQGAVPGEQYPEQGAVPGEQYPEQGAVPGEQYPEQRAVPGEQYPEQGAVPGEQYPE
QGAVPGEHGEEQGVVPGEHGEEQGAVTEEAYIKEDGEEQEAVPGQHGEEQGVDHGEQYPD
QPGEEQGAVDGPGPTVVYHEELPFPVEPQDPFTPTSFPQDLEPTEDTWQPEKEVSNPESY
QPAPEEANLDSNYPVTPYDELNANPTLYPPSPETNYESGDLTTAHKDNIGSPDPYQPSLE
SNMESGEPSIEGVPGTALEAPVPTTAYEEVDGSNDPHPMPGTTPESGKPTESQYGISEES
HMQTEITQETEHYTFTSETAGSNVSGVEATTRYDSSPEEQLESGLPTPPEEDHSGDEHAI
QVEHVMDTVYPSTSYDLSGGSIRPEGAIAGDVEDTSVSSTSPHEEMELFPDQSTTQPPYW
ENTPEYRRTNSVDHSASVLLPEEHTTSLDSLVIQTGENSGSATAESENLATLSPVEMDPY
VLIPTSEYAYDPTQEQSGVTSPDSSTLDDHVEQEAGGTVDSLPEVSMGSTDQDEHTDLGS
VPTDEVLTVTYDTGSNEASGVHEGMLDVTLLTSPKPITYSPPTQRSVEAEASSPGDFITF
IPESSVPSGFDPLEEGLEKVEREGLGEIPEVVETTTPETASGVEGSRDEENGQEVSGEEE
SGQEARGDKESGQEVSGQEGVESGSGSGSGEVHSASAESGESSGILEPEV
NT seq
3389 nt
NT seq
+upstream
nt +downstream
nt
atgagattggagatgctcctgtctttgctgctgtgtgtcatctgtccgctcgtcctaccg
tcctcctctacccccagccaagcctcagatgactccagactcctacaggtgaccatccct
acgacccctcccttatctgccgttttggggggctctcttaccctaccttgcctggtgtct
ctgtcccacccgccccccaacacgaatggccgccacgccgtcctctccctaccccgggtc
aagtggagcgtgctgtcccaggggcacgagactgagatcctggtggcccgaggggacagg
gtgaaggtcagcgaggcctacagggaccgagcctccctgctccattacgcttcctccccg
gccgacctcaccctgaggctggatggcctgcagtacaacgactctggcttctaccgctgt
gaggtgcagcagggcctggaggatgccgacggtgtggctcaggtcaaggtcaaaggggtg
gtgttccactaccgggatgcttccagtcgctatgcctttacctttgcgcaggcccgggac
gcctgtgaagagatcggggctcacatcgccaccccagagcagctcttggcagcctaccac
agtggctatgagcagtgtgatgcgggctggctctcagaccactcagtgagatatcccatc
cagatgccacgagagggatgttttggagacatggacgggcatcctggagtgaggaactat
gggctgctggaacctgatgagctgtacgatgtatactgttatgtcgagaacatagagggg
gaagtgttccatggatctgccccccgaagtttcaccctgtgggaagctaaggcctattgt
ctggctcagggagcggagctggctaccacaggtcagctgtatgcagcctggaatgacgga
ctgaacgcctgcagcccggggtggttggctgatgggagtgtacgctaccccattgtcact
cccagggagcgttgtggtggaggggagcctggggtcaggactgtctatcgccatttgaac
cagacaggctttccagaggcacacactcgccacgacacttactgcttccgaggcaacagc
aacactcacaccgaatctccccatgattacctggcaacagagccagaggacatcggccag
gacattgtgacactgtttgagcctctggaggaattcagtcaggtgacggagcaggtggtg
agcgaagaagctcagggctccctgactaccctccctattccagaggagcagcacccatca
gagcatatagaggagcagggggctgtccctggagagcagtacccagagcagggggctgtc
cctggggagcagtacccagagcagggggctgtccctggggagcagtacccagagcagagg
gctgtccccggggagcagtacccagagcagggggctgtccctggagagcagtacccagag
cagggggctgtccctggggagcacggagaagaacagggggttgttcctggagaacacgga
gaggagcagggggctgttactgaggaggcatacatcaaggaggacggagaggaacaggag
gctgtgcctgggcagcacggagaggaacagggggttgatcatggggagcagtacccagac
cagcctggagaggagcagggggctgtcgatggcccgggccctactgttgtctatcacgag
gagctaccctttccggttgaaccccaagacccattcacccccacatccttcccccaagac
ctggagcccacagaggacacctggcagccggagaaagaggtcagcaacccagaatcatat
cagcctgcccctgaggaggcaaacttagattcaaactacccagtcacaccctatgatgag
ctgaatgcaaacccaacactgtatccaccttctcccgagacaaattatgaatcaggtgat
cttacaactgctcataaagacaacattggtagccccgatccctaccagccctcgttagag
tcaaacatggaatcaggagagccctctatagagggtgtaccagggactgctctggaggcc
cccgtgcccaccacagcatatgaggaggtggacgggtccaatgatccacatcccatgcct
ggcacaacccctgagagtggtaagccaacagagtctcagtatggtatttcagaggaaagc
catatgcaaacagagatcacccaggagaccgaacactacacttttacctctgagaccgca
ggctctaatgtatcaggagttgaagccactactaggtatgacagctctccagaggagcaa
ctggaaagtgggctgcccacacctcctgaggaggaccactccggagatgagcatgccatc
caggtggagcatgtcatggacactgtctacccaagcacctcttacgacctatcaggaggg
tctatcaggcctgagggagccatcgctggggatgtcgaggatacatctgtatcttccact
tcacctcacgaggaaatggagctcttccctgaccagtccaccactcagcctccatactgg
gagaacacacctgaataccgccgaaccaactctgtggaccacagtgccagtgtccttctc
cctgaggagcataccacatcactggactcattggtcatccagacaggggagaacagtggc
tctgctactgctgagtcagaaaacctggctaccctaagcccagtggagatggacccctat
gtactgatccctacctctgaatatgcttatgaccccactcaggagcagtctggtgtcacg
tcacccgactcctctaccctagatgaccatgtggagcaagaagcaggaggcacagtggac
tcattaccagaagtttccatgggttccactgaccaggatgagcacactgacctgggttca
gttccaactgacgaagtcctcacagttacttatgacactggctctaatgaagcctctggg
gtccacgagggaatgcttgacgttaccctcttgacatcccccaaacctataacctattcc
cccccgacccagcgatccgtggaagcagaggccagctccccaggtgacttcataaccttc
atcccagaatccagcgttccatctgggtttgatcccctggaggaagggctggagaaggtg
gagcgagaggggttgggtgaaatcccagaagtagtcgaaactactaccccagagacagct
tctggtgtggaggggagtagagatgaggagaatggtcaggaggtgagtggagaagaggag
agtggtcaggaggcgaggggagacaaggagagtggtcaggaggtgagtggccaagaggga
gtagagtccggctcaggatcaggatcaggcgaggtgcattctgcatctgctgaatctgga
gaaagctcagggatccttgaaccagaagt
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