KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111965232
Entry
111965232         CDS       T05762                                 
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111965232
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111965232
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_NOL10_N Beta-prop_Aladin PAC11 DSE1_N TPR_19 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR41 TPR_2 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR19_1st ANAPC3 Beta-prop_VPS8 CFAP251_N TPR_BSK1_C TPR_1 TPR_17 ASA1 TRM82_WD Beta-prop_SCAP RMD1-3 Barstar TPR_16 TPR_6 CFAP70_TPR_C TPR_9
Other DBs
NCBI-GeneID: 111965232
NCBI-ProteinID: XP_023845059
LinkDB
Position
LG6.1:17160073..17175249
AA seq 676 aa
MTCCEAMSAVNITRDILHRQIRDKRALGFQRQYHVTDPFISRLGLEAELQGHTGCVNCLE
WNEQGDLLASGSDDQHCIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILVTGAADT
KVHVHDVSVKETIHMFSDHTNRVKRIATAPMWPNIFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPQNNNYLAVGANGPFVRLYDMRMIHNHRKSASQSTSAGVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTYLLPKKCQSTDVQNGKTTNGVSNGIHLPASRLRFAESKVFSGSGELPPH
LERIKQQANDAFARQQWTQAIQFYSLGIHEASHNAMLYGNRAAAYMKRKWDGDHYDALRD
CLKALSLNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKA
ALFSKMDSAEDKKGNSSIRFHAFNRKESIPEDEVVLRERSYDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETANLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETESESGNGRVVEDMEGAAAANQRRMNADPLEVMLLNMGYRITGLSGRGPEG
SDDEDSSDGQVQCRPS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgacttgctgtgaggccatgtctgctgtgaacatcaccagagacatcttgcacaggcag
atcagggacaagagagcattgggcttccaaaggcagtatcatgtcacagaccccttcatc
agtagacttggactggaggcagagttgcagggccacactgggtgtgtgaactgcctggaa
tggaacgaacagggagatctgctggcatcgggctcagatgaccaacattgcatcatctgg
gaccccttcaaacacaagaagctcaccactatgcacacagggcatgcagcaaacatcttc
tctgtgaagtttctccctcactcaggtgaccgtatcctcgtgacgggtgcagcggacacc
aaggttcacgtgcatgacgtgtctgtcaaggagaccatccacatgttctccgaccacacc
aaccgcgtcaagcgcatcgctacagcccccatgtggcctaacatcttctggagtgctgcg
gaggacggcatcatcaggcaatatgacctgcgggagagcagtaagcgttcagaagtgctc
atcgacctgacggaatactgtggtcagctggtggaggccaagtgtttggctgtcaacccg
caaaataataactacctagcagtgggggccaacgggccctttgtacgcctctacgacatg
cgcatgatccacaaccacaggaagtctgcgagtcagagcacatcggcaggagtgcacaca
ttctgcgacaggcagaagcccatcccagacggagcggggcagtattatgttgcagggcac
ctgccagtgaagctccctgactacaataaccgcctgagggtcctagtggccacctacgtc
accttcagccccgacggcaccgagctgctagttaacatgggaggagaacaggtgtatcta
tttgacttgacgttcaaacagaagccgtacacctatctgcttcccaaaaagtgtcaatca
acagatgttcagaatggaaagacaaccaacggtgtgtcaaatggaattcacttgcctgcc
agccgacttcgattcgcagaaagcaaagtcttctctggttctggtgagctgccgcctcac
ttggagcggataaagcagcaggccaacgacgcgtttgcgcggcagcagtggactcaggcc
atccagttctacagtctgggcatccacgaggccagccacaacgccatgctgtacgggaac
cgcgccgccgcctacatgaagcgcaagtgggacggtgaccactatgatgcgctgagggat
tgtctgaaggccctgtccctcaaccctgggcacctgaaggcccacttccggctggcgcgc
tgcctctttgagctgaagtacgtggccgaggctctggagtgcctggatgacttcaagggc
aagttccccgagcaagcccacagcagcgcctgcgacgccctggataaggatatcaaggcc
gccctcttttccaagatggactctgctgaggacaaaaagggcaacagctcaatccgcttc
cacgcgttcaacaggaaggagtccatcccggaagacgaggtcgtcttgagagagcgcagc
tacgactacaaacaccgctactgtggtcattgcaacaccaccacagacatcaaggaggcc
aacttctttggcagtaaaggccagtacattgtgagcggctccgacgatggctcctttttc
atctgggagaaggagactgctaacctggtgcggatcctccagggggacgagtccatagtc
aactgcctgcagcctcaccccagttactgcttcctggctaccagtggcatcgaccctgtg
gtgcggctctggaaccccaggccggagacggagagtgagagtgggaacggtcgcgtggtg
gaggacatggagggcgccgctgcagccaaccagcggcgtatgaatgccgaccccctggag
gtcatgctgctcaacatgggttaccgcatcacgggcctcagcggccgcgggccagagggc
tcagacgatgaggacagctcagatggccaggtgcagtgccggcccagctag

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