Salvelinus sp. IW2-2015 (Arctic char): 111965235
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Entry
111965235 CDS
T05762
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111965235 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111965235 (pex5)
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111965235 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_7
TPR_Slam
TPR_20
TPR_9
TPR_10
ANAPC3
MAS20
PEX18_PEX21_C
Connexin50
Motif
Other DBs
NCBI-GeneID:
111965235
NCBI-ProteinID:
XP_023845065
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Position
LG6.1:16939633..16955046
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AA seq
587 aa
AA seq
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MQQAPPRPPHSFDMGQLLEEMQQIDQQSYRQAPQKAPGVAALALSGDWTSEFLSGADAAT
ASSGQAGLGDPADADWTREFITDGTDPGRWAEEYLEQSEEKLWLGDLGEREQEWTKEYLP
GDELKQTANELVAKVNDPKLQNTEFLRFIRQIGEGSVTVEDRAGKQHTDRAQAKEAQNWA
SNLNQVSVESAESWVDEFATAGPDFQQAKAAVGSDLDFWEKLQQEWEEMAKRDAESHPWL
SDFDQMLSSSYDKGYQFEEDNPYMSHQDPLAEGVRRMEAGDIPGAVRLFESAVQREPDNQ
LAWQYLGSCQAENEQEFAAISALRRCIELKKDNLTALMALAVSFTNESLHRQACETLRDW
LRHNPAYRPVLEQSEREREKDGGTRERERFGSLLPESLFTEVQSLFLSAANSDPARVDPQ
LQCGLGVLFNLSGEYDKAVDCFTAALSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRAL
ELQPGFIRSRYNLGISCVNLGAHREAVEHFLEALSLQRQASGEGETVSASRAPGGAAATM
MSDNIWSTLRMALSMMGESSLYTAADRRDLDTLLSYFCQREGEAGGE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcgcctccacggccccctcacagctttgacatgggccagttactggaggaa
atgcagcagatcgatcagcagagctacagacaggctccacagaaagctccgggtgtggct
gcgttggccctgtctggtgattggacgtctgagtttctgtcgggagcagatgccgccacc
gcctcttcagggcaggcgggacttggagacccggctgacgctgattggaccagagagttc
atcaccgatggcacagatcccgggcgttgggcagaggagtatctggaacagtcagaggag
aagctatggctcggagacctgggagagagggagcaagaatggacgaaagagtacctacca
ggagacgaactgaagcaaacagccaatgagctggtcgcaaaggtcaatgaccccaagtta
cagaacaccgagttcctgcggttcattaggcagattggcgagggcagtgtcacagtggag
gacagagcaggcaaacagcacacagatagagctcaggccaaggaggctcagaactgggcc
tccaacctcaaccaggtctcagtggagtcagcggaatcatgggtagatgagtttgccact
gcaggtccagatttccagcaagctaaggctgctgtggggagcgacttggacttctgggag
aagctgcagcaggagtgggaggagatggccaagagagatgcagaaagtcacccctggctc
tccgattttgaccagatgctcagcagctcctacgacaaggggtaccagtttgaggaggac
aacccgtacatgtcccaccaggacccccttgctgagggggtgaggaggatggaggcaggg
gacatccctggggccgtgcgcctgtttgagagcgccgtacagagagaaccagacaaccag
ctggcatggcaatatctgggatcctgtcaggcagagaacgaacaagagtttgcagccatc
agtgccctccgcagatgcatagagttgaagaaggacaacctgaccgctctgatggcactg
gccgtcagtttcaccaacgaatcgctgcacaggcaggcctgtgagacccttcgcgattgg
ctgaggcacaacccggcgtaccggccagtcctggagcagagtgaacgggagcgagagaag
gacggagggaccagagagcgggagagatttggctcactgctgccagaatctttgtttaca
gaggtgcagtccctgttcctcagtgcggcgaactctgaccccgcccgcgtcgacccccag
ctacagtgtggcctgggagtcctcttcaatctgagcggggagtatgacaaggccgtggac
tgtttcaccgcggccctctccgtcacaccacaggactacctgctgtggaataaactgggc
gctaccctggccaatggaagccgctcagaggaggctgttgccgcctacaggagggcgctg
gaactgcagccaggcttcatccgcagtcggtacaacctgggaatcagctgtgtcaaccta
ggagcccacagagaggccgtggagcacttcctggaagccctgtccctgcagcgccaggcg
tcgggggagggcgagacggtcagtgccagccgggccccggggggcgccgcagccaccatg
atgtccgacaacatctggtccaccctgcgcatggccttaagcatgatgggagagagctcg
ctatacacggcggccgaccggcgagacctcgacacgctgctctcctacttctgtcagagg
gagggggaagcggggggggaatga
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