Salvelinus sp. IW2-2015 (Arctic char): 111965307
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Entry
111965307 CDS
T05762
Name
(RefSeq) prolactin regulatory element-binding protein isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111965307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111965307
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111965307
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
VPS11_N
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
111965307
NCBI-ProteinID:
XP_023845161
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Position
LG6.1:21292559..21299447
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AA seq
428 aa
AA seq
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MGKRRMPDLYRAPFPLYTIKVDPKTGWVITAGGGGGSKTGIKNAVHFLDLELVGDQHCAT
LVHSHDTDTRATMNLAIGGDVIAAGQDGRCSLMRFRQRQPRGKAAAKDAGGGSEQGAARR
RAGKGGKGSEGAAARGNVSEMNDNTTQISVDTFGEVQSDLNPQDPLQKCVRFSPDLRLLL
TGGTDGHIRVWEYPSLKEKLDFKAHEGEIEDLDISPNNKHLVTVGRDFACSIWSGNQLAM
SLCWHEKMPQIAAKSYRYMSCRFGKVEDQKDALRLYTVQIPHKRDRKPPQCYLSKWDGQN
FLPMLTNPCGTEVISTLAVSDSGTFLGLGTVTGSVAIYAAFSLQKLYYVQESHGIVVTDL
AFLPDTPKGQSLKGNNEAAMLSVAVDSRCQMHTVRNRRSFPIWLVLFFCGLMVVGAVLLL
QHLFPGFM
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacggaggatgccagacctgtatagggcccccttccccctctacacaatcaaa
gtggaccccaaaacaggatgggtgatcactgcaggaggtggaggcggttccaagacaggc
ataaagaatgcagtgcacttcctggatttggagttggtaggagaccagcactgtgccacc
ctggtgcactctcatgacacagacacgcgtgccaccatgaatctggcaataggcggggat
gtgatcgccgcagggcaggacggcagatgcagcctcatgcgcttcagacaacgccagccc
aggggcaaggctgcagccaaagacgcagggggcggcagtgagcagggcgcagctaggaga
cgagctgggaaagggggtaagggtagtgagggagctgctgctaggggcaatgtgtctgag
atgaatgataacaccacccagatctctgttgacacgtttggggaggtgcagtcggacctc
aacccccaggaccccctccagaagtgtgtgaggttcagtcccgatctccgcctcctactg
actggcgggacagacggacacatcagagtgtgggagtacccctccttaaaagagaagttg
gacttcaaagctcatgagggggaaattgaagacttggacatcagtccgaataacaagcac
cttgtgacggtgggccgggactttgcctgcagtatatggagtggcaaccagctggccatg
agcctctgttggcatgagaagatgcctcagatagcagcaaagtcataccgctatatgtct
tgcaggtttggaaaagtcgaggaccagaaagacgccctgaggctctacaccgtccagatc
ccccacaaacgagacagaaaacctccacaatgctacctctctaaatgggacggccagaat
ttcctacccatgctgacgaacccctgcggcactgaggtcatctccaccctggctgtcagt
gactctggaacctttctcggccttgggacagtgacgggatcagtagcaatctatgccgcc
ttttcactacagaagttgtactatgtgcaggagtcccacggcattgtggtgaccgatctg
gctttcctgcctgacactcccaaaggccagagcctcaaagggaacaacgaggcagccatg
ttgagtgtggctgtggacagccgctgtcagatgcacactgtacgaaaccgaagatccttc
cctatctggttggtgctgttcttctgtggcctcatggtggtgggagccgtcctgctcctg
cagcacctcttcccaggattcatgtag
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