Salvelinus sp. IW2-2015 (Arctic char): 111965318
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Entry
111965318 CDS
T05762
Name
(RefSeq) triadin isoform X1
KO
K03145
transcription elongation factor S-II
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111965318
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111965318
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
111965318
NCBI-ProteinID:
XP_023845176
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Position
LG6.1:21844527..21881045
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AA seq
782 aa
AA seq
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MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTASPVRSPLEKDTSHKRL
DVSDSDPESEKEEYSDKRQKEKHNVEHKKDERAVDLKKERNTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEEPKKERHFEKSRKERHVPIHETKNERHVQEPKKKSYLEEPKNESHTD
EPRRERFADELRKERHTEERRKEIPMYEPRQERPVENHRRGFERRSVLDDLYPACYSPPR
PPRPPRLPPPVRRMSGEVNKGVKKEVKKERERRDSSDTLSPSHPRPTPPSRRPSVKGKKE
RKKDPPDPNSPLPPLHPHPSMPTAAEVKKERKEPLRISVVRKEPPDPNAPFAPLPLHLHP
PPHMKRPSVEVKKEREESSDYKPVSLKVTPSDHVKKDRKDSDSKVPKKTSVDAKKERKDL
SDSKPKPAKRQSLDSSDSNPKRSKRPSLDGKKDRKDSTDSKPSHSVKRHSTDSKSDRRDS
VDSKTSNSPSAKKLSSETKEFHGSKSSHPGPLQRKSSTDSIERRGKPEMPKIPSTPTSPM
SPSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTE
MGSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNN
LTKEAIREHQLSKTSGTISDLFQCSKCNKKNCTYNQMQTRSADEPMTTFVLCNECGNRWK
FC
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgctctggacctgctgaatgaactgaagagcttcaacatgacgctg
aaacttctgcaggaaacgaggatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtcgtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaatgagatgaagaatggggttgactccaac
aaatccacagcgtctccagtcaggtccccgttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagatcctgaatctgaaaaggaagaatactctgacaaacggcaaaaa
gagaagcacaatgttgaacacaaaaaagatgagagagctgttgacctaaaaaaggagcga
aatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtacctatacatgaaacaaaaaatgaaagacat
gtgcaagaacccaagaaaaaaagttatctcgaagaacccaaaaatgagagccacacagac
gaacccagaagggagcgtttcgcagatgaactgagaaaggaaagacacacagaggaacgc
agaaaggagataccaatgtacgaaccccgacaagagagacctgttgaaaaccacagacga
gggtttgagaggagaagcgtcttggatgatctttaccccgcttgttactctcctcctcgc
cccccccgaccaccccgccttcctccccctgtcagacgtatgtctggggaggtgaataaa
ggggtgaaaaaagaggtgaagaaggagagagagaggagagattcttcagacactctgtct
ccttctcatcctcgtcccacccctccgtccagacgtccctcagtgaaggggaagaaagag
aggaaaaaagatcctcctgaccctaattccccgcttcctcctcttcatcctcatccttct
atgcccactgcagcagaggtcaagaaggagagaaaagagcctctgcggatttctgtggtt
cgaaaagagcctccggaccccaatgctccatttgctcctcttcctctccatctccatcct
ccccctcatatgaagcgcccgtcagtggaagtcaaaaaggagagagaagagtcatcagat
tacaaacccgtttctctgaaggtgacgccctctgaccatgtgaaaaaagatagaaaagac
tccgatagcaaagtgcccaaaaaaacatctgttgatgccaagaaagaaagaaaggatttg
tcagattccaaaccaaaacctgctaaaaggcagagtctggactcctcagattccaatcca
aaacgttctaaaaggccaagtctggatggcaagaaagacagaaaggactccactgactcc
aagcccagccattctgtgaaacgtcattcgactgactccaaatcagacaggagggactct
gtggattccaagactagcaactcaccctcagctaagaagctctctagcgagacgaaagaa
tttcatggctccaagtcctctcaccctggccctctgcagagaaagtcctcaacggacagt
attgaacggagagggaaaccagagatgccaaagatcccctccacccccaccagtcccatg
tccccctccttcagctcagcaggggttcccctgtccccttgccttgccactggagaaacc
atcagggacaagtgcatcgagatgctggctgctgctctacgtacagatgacaacttcaaa
gaatttgggacaaactgtgactccatggcagcagagattgaagatcatatttacacagag
atgggatccacagatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaag
gaccccaaaaaccctggactgcggaggaacgtcctggctggaggcatcgagctgagacgc
ttcgccatcatgtctgctgaggagatggctagtgatgagctgaagcagctcaggaacaat
ctgactaaggaggccattagggaacaccagctgtccaaaaccagcggtaccatttctgac
ctgtttcagtgcagcaagtgcaacaaaaagaactgcacctacaaccagatgcagacccgc
agcgctgatgagcctatgactacttttgttctgtgtaacgagtgcgggaaccgctggaag
ttctgctga
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