Salvelinus sp. IW2-2015 (Arctic char): 111965336
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Entry
111965336 CDS
T05762
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111965336
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111965336
Factors involved in mRNA localization
Other mRNA localization factors
111965336
mRNA cycle factors
Stress granule specific factors
111965336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
111965336
NCBI-ProteinID:
XP_023845220
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Position
LG6.1:24698436..24708873
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AA seq
592 aa
AA seq
DB search
MDELAVEVRGTSGAFYKGYLKDVHESAVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNP
NKTATKNSFLKIQLDVPEDLLQMCSKDSHKDFKKAVGAFNVTYDSDKRQLVILSVNEITT
KRAQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENDKKPPPVDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRAPGTGRPDNKIFIVDNGGLGMMGMSSQRGGKPF
SRGGGGRGRRGGPSFTSGTNSEASNASETESXHKDELSDWSLAPTDELTGGFPKRPDTRK
RGGGGPRGRGGRGRGGGGFKAEDIQWTESRSRNTRDPKLRPQEDSLQIRVDSNNERSVHA
AARGPPGPAGDGIVLGANRQRPIKERPIKKEKQEGPSGESTAVPPVVVNGVS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagctgttgaagtcagggggacgagtggggctttttacaagggatatttg
aaggatgttcatgaaagtgctgtcacagtgtcctttgaaaacaattggcagccagaacgt
caaatccccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggctaatgataaagaaccatgt
gggtggtggctggcgaaggtccggatggtgaagggagagttttatgtcatagagtatgca
gcttgtgatgccacgctcaatgaaatagtcacattagagaggttacggcctgtcaaccca
aacaagacagctacaaaaaactccttcctgaaaattcaactagacgtcccagaggacttg
ctgcaaatgtgttcgaaagactctcataaagattttaagaaggcagtgggagcattcaat
gtcacttatgactcagacaaaagacagcttgttattctgtctgtgaatgagattacaacc
aaaagggcgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaacgaggaggctagccgccaactggagagctctcggcagctggcatctagg
ttccatgagcagtttgtggtccgagatgacctgatggggctggccatcgggactcatggt
gccaacatccagcaggccaggaaagtacctggggtcaccaccatagacctggacgaagag
acctgcactttccacatctatggcgaggatcaagaggcagtgcgcaaggctaggagcttc
ttggaattttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatgggaagttgatccaggaagtagtggataaatctggtgtcgttcgagttcggatt
gaggctgagaacgacaagaagccacctccagtggatgarggcatggtgccgtttgtcttt
gtgggtacaaaggaaagcatttccaatgctaaagtactgttagactatcatctcaactat
ctgaaggaagtggaccagctgcgcatggagcggctgcagatagatgagcagctgaggcag
attgggggaggaggacccagggccccggggactggacggcctgacaacaagatcttcatt
gtagacaacggtggcctgggcatgatgggcatgagctcccagagaggagggaagcctttc
agcaggggaggaggaggccgtggccgacgcggtggtccctcttttacctccggcaccaac
tctgaggcttccaatgcgtctgagacagagtcggamcacaaggacgagctgagcgactgg
tctctggcccccactgacgagctgacagggggtttccccaaacgacccgatacacgcaag
agagggggaggagggcctcgcggacggggagggagaggaagaggagggggaggcttcaaa
gctgaagacatccagtggactgagtcacgttcacggaataccagagaccctaagctaagg
cctcaggaagattctttgcagatccgagtggacagtaacaatgagaggagtgtccatgct
gcagccagaggtccccctggccccgcaggtgacggaattgtcctcggagcaaaccgacag
agacccatcaaagagcgacctatcaagaaggagaagcaggagggccctagtggtgaatcc
accgctgtgcccccggtggtggtgaacggggtgtcgtag
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