Salvelinus sp. IW2-2015 (Arctic char): 111965337
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Entry
111965337 CDS
T05762
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111965337 (aff2)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111965337 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
111965337
NCBI-ProteinID:
XP_024002895
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All DBs
Position
LG6.1:24730385..24909354
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AA seq
1413 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRSALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTN
KGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPGPSFFTEGAQRTSNRT
GTGHNTTSMPPPPSSSSLTSSTRLSGHQSSKKSRSSDWLQGAHCSSSTSTQEVGGQVVGV
PTSSRGKHLSTHEQQQQQPQRHEELFSSQGDVVGHKGDSSSSPNSSTSRRHGGGQQQAPS
AAEHGGYKDSNNHVKSPLEQEPGSHGSISPVASTSLLPSGLSTPTFPQGLHVKPSAVQQQ
KPTAYVRPMDGQDQVPLDSPELKPPLEVGDMGYSNLAFGSTTTSSKSKLPKLTLTQTGEF
ATVLFGLMAGITLSRGGRGCAAPDRGVSSPPLIPAGCLPVLVSMPQQTHTPSTPTQRALS
HGRNKADIEHLRESRLESKWGSPQVTVIWTVSLSSDSSCVEEILREMTHSWPPPLTAIHT
PGKAEQTKFPIPSKESQHLPSGYAGQKRCNVPCNKPATKSVPQKSMLEDDLKISSDEEDT
DQQAAEKPKPRSTPLSIPVATSRTTDPGLSSGASGSSSESESSSESDSDSESSSSDSECN
GASRTATPEPEPPSTNKWQLDKWLNKVTPHNKALINTQPERESHGLSSSQPDHSQQAPED
QGPAPGKSKPGPTALLAPTDPKERALLSPIREKAKPKTGPKVSEGKGSKVKSPAVVAVEP
APARRSLGKKQPKKVERSSSLEEHTSWSKPINPIISTTPKEKDPPSLLEQPKSRTKSTSG
KTAPRKEPRTTTTTTITPAPLPLAPVLEKKKHRGPSKIIPKSKEFIETESSSSECHSEPE
ELVKIHNPPCPGPSSLQTLKAAKDCNSNILTVSSLTSTCSSSISIPDPGAMDLLGDPLFS
SVPIVQNKLLSPLRDFEDIKSLWVKIELSFLSKIPGQDPPEPPSVKVEPREPREPSIKHR
RQSPASLQSTPVEKPPSKAKRKHKMDHCDAVGGSKKLRLEKDSLLLPPCISPIHNHKNIS
TNDSLRKQPRKREEKRELLPPLLSPLSDEPPIRQRRTSECSSFSQEGGASSATSTLLLPT
LSCSLPNFSSSSSSSSHKHRSKGESKSFSRSKTSSEEDTHSKPSGSFHGNGHSDSDVWSN
PSSLSMDHMEPRRPKLTFNNTVHNADYCMQEAKKLKHKADALMEKFGKAINYTDGALSFI
ECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLY
LRMFKLKKDHAVKYSRSLMEYFKKSSQAPSPWGANGKSTGTPSPLSLSPSPVSSVSSSTG
PGLAGSCPSGASSNVAIPQRIHHMAASHVNITNNILRSYEHWDTAEKLATESQEFFQELD
SMMEPLSQHSSMIELVRYIRQGLHWLRIEAHML
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattac
gagcaggaccgcagtgcgctcaagaagagggagtgggagcggcgractcaggaggtgcag
caggacgaagatctcttctcctccgggtttaatctgttcggggagccatacaagaccaac
aaaggtgatgccctggccaaccgggtacagaatactctggggaactacgatgagatgaag
gagctcctgaccagccactccaaccagagccacctggtggggatccccaagaactctgtt
ccccagacccccggccccagcttcttcaccgagggggcccagaggacgagcaacaggacg
ggcacggggcacaataccacctccatgccccctccgccctcctcttcctccctgaccagc
tccacccggctgagcggccatcagagctccaagaagtcccgctcctccgactggttgcag
ggagcccactgctccagcagcaccagcacacaagaggtgggggggcaggtagtgggggta
ccaaccagcagcaggggaaaacacttgtctacccatgagcagcagcagcagcaaccccag
agacacgaggagctgttcagctcacagggcgacgtcgtgggccacaagggagactccagc
agcagccccaactcctccacctccaggaggcatggcggtgggcagcagcaggccccttcg
gcagctgagcatggcggatacaaggacagcaacaatcatgttaagtctcccctggagcag
gagccgggctcccacggktccatttcccccgtggcctccacctccctgctgcccagcggc
ctttccacgccaaccttcccccagggcctgcacgtcaagcccagcgccgtgcagcagcag
aagcccacggcctacgttcggcccatggacggccaggaccaggtgcccctggactccccg
gagctcaaacctcctctggaagtgggggacatgggctacagcaacctagcctttggcagc
accaccaccagctccaagagcaagctgcctaagctgaccctgacacagactggggagttt
gccacagtgttgtttggcctcatggccggcatcacgctaagcagaggtggcaggggctgt
gcagcgcctgacaggggagtctcctcccctccactcatcccagctgggtgtctccctgtg
ttagtgtccatgccccagcagacccacacccccagcacgcccacacagagggcgctgtcc
catgggaggaacaaggcagacatagagcacctccgagagtcacgcctggaatctaaatgg
ggttcaccacaggtgacggtgatatggacggtcagcctgtccagtgactccagctgtgtg
gaggagattctacgggagatgacccactcctggcctcctcccctgactgccatccacact
ccaggcaaagctgagcagaccaagttccctattccctccaaggagtcacaacacttaccc
tcaggatacgctggacaaaagcggtgcaatgttccctgtaacaagcctgcaaccaagtct
gtaccacagaagtcaatgcttgaggatgacctgaagatcagcagtgacgaagaggacact
gatcaacaggcagcagaaaagcccaagcccagaagtacacctctcagcatccctgtggcc
acgtctcggaccactgacccgggcctctccagcggcgcctcgggcagctccagcgaatca
gagagcagctccgagtcagactcagatagtgagagcagctccagtgacagcgagtgtaac
ggggcctcccggaccgccaccccagagcctgaacctccatcaacaaacaaatggcagctg
gataaatggctgaacaaagtgaccccacacaacaaagcacttatcaatacccagccagag
agagagagccatgggctcagcagctcccagcctgaccacagccaacaggccccagaggac
cagggcccggccccagggaagagcaagcctggccccaccgccctgctggccccgaccgac
cccaaggaacgggccctcctcagccccatcagagagaaggccaagcctaagactggacca
aaagtctcagagggaaagggttcaaaggtcaaatccccagccgtggtggcggtggagcca
gccccagccaggcgcagcttggggaagaaacagccgaagaaagtggagcgctcgtccagc
ctggaggaacacacctcctggtccaagcccatcaaccccatcatcagcactacccccaag
gagaaggaccctccatccctcctggagcagcccaagtccaggaccaagagcaccagtggg
aagactgcccctaggaaggagcctcgcaccaccactaccactacaattactccagctcct
cttcccctggccccagtcctggaaaagaagaagcacagggggcccagcaagatcatyccc
aagtccaaggagttcatcgagacggagtcttcgtcwtctgagtgccactctgaaccagag
gagctggtcaagatccataaccctccctgtccaggacccagcagtctgcagactctcaaa
gcagccaaggactgcaacagcaatatcctgactgtcagtagccttaccagcacctgcagc
tcttccatatccatcccagaccctggggccatggacctcctaggggaccccctcttctcc
tccgtccccatcgtccagaacaaactgctgtcccctctcagggactttgaggacatcaag
tcactgtgggtgaagatcgagctgagcttcctgtctaagattccagggcaggacccccct
gagcccccttctgtgaaagttgagccccgggaaccacgtgaacccagcattaagcacaga
cgacagtcccccgccagtcttcagtctacccctgttgagaaaccacctagcaaggccaag
aggaaacacaagatggaccattgtgacgctgtcgggggaagcaagaagctacggttggag
aaagactccttgcttcttcccccatgcatctcaccgatacacaaccacaagaacattagc
acaaacgactctctgaggaaacagcccaggaagagagaggagaagcgagagctgctgcct
cccctgctttctccgctctccgacgaaccccctatacgccagcgcaggaccagcgagtgt
tcctccttcagccaggagggcggtgctagcagcgccaccagcaccttattgctacccacc
ctcagctgctctctgcccaacttctcctcctcatcctcctcttcctcacacaagcaccgc
agcaaaggagagagcaaatccttctcacgttccaagacaagcagtgaggaagatacccat
agcaagccgtctggcagtttccatggcaacggtcactccgattctgacgtttggtccaac
ccgtcatctctgtccatggaccacatggagcctagaaggcccaagctaacgttcaataac
acagttcacaacgcagactactgcatgcaagaagccaagaaactaaagcacaaagcagat
gcactgatggagaagtttggcaaagccattaactatactgatggggcgctgtcgttcatc
gagtgtggcaacgccatggagcgggatccgctagaggccaagtctccatacactatgtac
tctgagacggttgaactcatcaggtatgccatgaggttaaagaactttacaagtcactca
gcaactgtagccgagaagaaattagctgtgttgtgcaatcgctgtttatccctcctgtac
ttgagaatgttcaaattgaagaaggaccatgcagtaaagtattcccgttccctaatggag
tatttcaagaaaagttcccaagcaccttcgccatggggagccaatggaaagagcacaggc
accccgtcgcccctgtctctgagtccctccccagtcagttcggtgagcagcagtacgggc
cctggccttgcgggctcctgtccctccggtgcctccagcaacgtggccatcccccagcgc
atccatcatatggccgctagccacgtcaacatcaccaacaacatcctccgcagctacgag
cactgggacacggcagagaagctcgccacagagagccaagagttctttcaggagctggac
tcaatgatggaacctttgagccaacacagcagcatgatagaacttgtgcgctacatacgt
caaggactgcactggctacggatagaggcccacatgttatag
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