Salvelinus sp. IW2-2015 (Arctic char): 111965546
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Entry
111965546 CDS
T05762
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965546
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111965546
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
111965546
NCBI-ProteinID:
XP_023845475
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Position
LG6.2:3238748..3242621
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AA seq
271 aa
AA seq
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MHVGYLLDKEGSMYHQGPVRRSGINIPPQNFVPTQQYSDFTGYHHVPNMDTHAQSSGAWG
APYGAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPPDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNTLASIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggataccttttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgttcccacgcaacaatattccgacttt
actggataccatcatgtgccaaacatggatacgcacgcacagtcttcgggtgcttgggga
gctccttatggcgcaccgagagaggactggggcgcctatagtctgggtcctcctaacact
attcctacgcccatgaacaactcctcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctccagataatatttctgtg
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttccacgggcaaaacaaggacgaaggaaaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggagttccattttaatcgttacatcactatcaga
agaaagtcagaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgccgagccaaggaaaggaaattaatcaaaaagaaaatgggatctgatggcagc
ggaggatcagtgcacagtgacccgggttcagtgagtcctctgccggtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaccttggcatct
attaggaacatacagcaagttactgtcactcagtag
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