Salvelinus sp. IW2-2015 (Arctic char): 111965631
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Entry
111965631 CDS
T05762
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04210
Apoptosis
salp04218
Cellular senescence
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04623
Cytosolic DNA-sensing pathway
salp04625
C-type lectin receptor signaling pathway
salp04920
Adipocytokine signaling pathway
salp05132
Salmonella infection
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111965631
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111965631
04218 Cellular senescence
111965631
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111965631
04621 NOD-like receptor signaling pathway
111965631
04622 RIG-I-like receptor signaling pathway
111965631
04623 Cytosolic DNA-sensing pathway
111965631
04625 C-type lectin receptor signaling pathway
111965631
09152 Endocrine system
04920 Adipocytokine signaling pathway
111965631
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111965631
09171 Infectious disease: bacterial
05132 Salmonella infection
111965631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965631
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
111965631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
111965631
NCBI-ProteinID:
XP_023845559
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All DBs
Position
LG6.2:complement(1170129..1202465)
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AA seq
913 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFPPMSLNNSLRTADGPYLQIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVSKTLEDRMTEAYRMGYNCGIVIHHEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGSGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDSDMGDDPSSGAVVADRAQSEEDASAGETKCVLEAR
LVDVAERQAEALFHYAVTGDVRYLMAPQRHLMTTQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEVQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEEQDEGYIPGMSPLNMAATAEVLEILNGKEYXPETTIPV
FIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSY
EVSGGMVMDLLEGLRMVDNSTALTVLQGALCKTEQAPLAPQSTTELLGRVQDLKLDGQED
SGVCDSGVELSTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctgcctcacccacagtactatgacatagagccaatatgg
gatcctctgaatttccctcccatgtcactcaacaactcactccggacagcagatggaccc
taccttcaaatcattgaacagcctaaacagcggggcttcaggttccgttatggctgtgag
gggccctctcacggtgggctcccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctgggcatcctc
cacgtgaccaagaagaatgtgagtaagacactggaggaccgcatgactgaggcctacagg
atgggttacaactgtggcattgtcatccaccacgagatagacgccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggta
cgcttctatgaggatgacgagaccgggctgacatgggaggcctttggggacttctccccc
actgatgtgcatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcccttcacctaccacccacagatcatagataaggaagaggtgcagaggaag
agacagaagaccctgcctaatttccaggactacagtggccaaggtggatcagggggcatg
taccggggaccagggggaggaggctccgctacggggggaggacccggctcaggtggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgacagcgacatgggcgatgacccgtcctcgggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgctggggagacaaaatgcgtgctggaggccagg
ctggtggatgtggctgagaggcaggctgaagccctcttccattacgccgtcactggagac
gtccgctacctgatggctccacagcgccacctcatgacgactcaggacgagaacggcgac
actggtctccatctgggggtgatccacagccagacagacgcagtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtgataacccagcagaaggaggcagccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacggctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggccaacagccta
tgttccctcagggacctcctggtgagcgggggcaatgtggaggtccaggagaggagctgc
ggccgcacggcactccacctggccactgagctggacaacgtctcccttgcaggctgcctg
ctactggaggggaatgctgatgtggactgctgcacctacaacggctccagccctctacac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagaaaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggaacaggatgaaggctacatcccagggatgagtcctcttaacatggctgccact
gctgaggtattggaaattctgaatggcaaagagtacaakccagagaccaccatcccagtc
ttcatcccccctcaaggcgacatgcggagcctgggctcagacacaaagcgggcattatgc
caggcacttgagtgccagggggggagctgggagagcctggcaaacacgctggggctgggc
atcctcaacagtgccttcagactcagcccctcccccgccagcacactgctggacagctac
gaggtgtccgggggaatggtcatggaccttttggagggactcaggatggtggataactcc
accgcgttgacagtactgcagggggcactgtgtaaaacagagcaggctcctctagctccc
caaagcaccacagagctcttaggacgtgtccaggatctgaagctggacggacaggaggac
agcggcgtgtgtgacagtggggtggagctctccacagcgtga
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