Salvelinus sp. IW2-2015 (Arctic char): 111965722
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Entry
111965722 CDS
T05762
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111965722
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
111965722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
111965722
NCBI-ProteinID:
XP_023845747
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Position
LG6.2:complement(4895617..4913248)
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AA seq
1014 aa
AA seq
DB search
MIVLFLLLCITDGVVSQIRYSVPEEAGHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFINEKIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKSLDREQQASHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NTPVGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVRSEVDFEES
SLYQIFVQAKDLGPNSVAAHCKVLVKIMDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVARDTGTP
SLATSKSIKVQVSDENDNAPTFTQLIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELFSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIIAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETXLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLKIYTCLTSDXC
LGCATCCSRHARARKKKLSKSDXMLVQRANVTGAGTAHVPVEESGSFGSHHQKQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGTDLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGNKSFSTFGK
ETPLSHHHQNHLHLSHHHATHANQAKLERKAFEALLSSTRAPYKPAYLTRKGVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttttgctgtgtatcacggatggagtggtctcgcagatacgctac
tctgtgccggaggaggctggacacggcacgttcgtggggaatatcgccgaggacctggga
ctggacatgaccaaaatcgcctcacgccgcttccaggttgtgcccagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcatcaacgagaaaattgaccgggag
cagatctgcaagcagagtgccagctgtcttttacaccttgaagtgtttttggagaaccca
cttgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgaaaccgacatcaccgtagagatctcggagagtgcagtccccggtacccggtttccc
ctagagagcgcattcgatccggacgtgggttccaatgcgctgcgcacatacgacatcacc
accaataactacttctacttggatgtgcagacgcagaccgacgggaacaaattcgcagaa
ctggtgctagagaagtcgctggacagggagcagcaggcgtcccacaggtatgtgctgact
gcagtggacgggggccagccgccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccagtgtactcagtgagtcttcaggag
aacacaccggtggggaccctcgttatccagctgaatgccacggacttagacgaggggcag
aatggggagatagtgtattcattcagtaaccatatctccagccgcgtcaaggacctgttc
gccatagacgcgcgcactggacgcatcgaggtgcgcagtgaggtsgattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatctcggacccaattccgtggccgcgcac
tgtaaagttctggtgaaaataatggacgtaaatgataatgctcctgatatcaccttcagc
acagtgaccgagtcggtgagtgaaagggcagccccgggcaccgttatagccctgctgagc
gtgactgacaaagatgctgaggaaaacggaaagattcacgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagatggaccccta
aatagagagaatgctgactcttattcagtgactgtagttgccagggatacagggacccct
tcccttgccaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagctcatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggacccagacgttggacagaacgctctcattagttactcc
ataatggagtgcgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaagag
acgggctacctttacgcactcagatcattcgattacgagcagttaaaagacttcactttc
atggttcaggcgaaagatgcaggtagccctgagctcttttcgaacgccacggtcaaagta
atcatcgtggaccagaatgacaaccctccctccgttattgctcctctgggtaaaaatggc
actgctagagagcctctgccccgctccgccgagcctggctacctggtaacccgtatcatc
gccatggatgcagacgacggagagaacgcacggctctcctacagcatccagcgggggaac
gagaacggcatgttccgcatggactggaggaccggagaattgcgcactgcccggcgcgtc
tccaccaagcgggacccaaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagcgtggtggag
gaccaccgggagaggggcaccgccaagtccaaggagackwcmctggacctcaccctcatc
ctcatcatcgccctgggctcrgtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgccagaaggacaaaaagctaaaratctacacgtgcctcaccagtgattgrtgc
ctcgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tcrgatatkatgctggtgcagagrgccaacgtcaccggmgccggtacagcccaygtgcck
gtggaagagtccgggagcttcggctctcaccaccaaaarcagaactattgctaccaggta
tgtctgacwccggagtcmgccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacaccagcgagcc
gagctcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgtaagctctaaagacagtggtcatggtgacagcgagcaaggcgacagtgaccat
gacgccaccaatcgaggtcactctaccggcactgatctcttctctaactgcacggaggag
tgcaaggcactgggacactccgaccgctgttggatgccctcctttgtgccctccgacggg
cgccaggcagcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcaataagtcattctccacctttggcaaa
gagacccccctcagccaccaccaccaaaaccacctccacctcagccaccaccatgccacc
cacgccaaccaagccaagttagagaggaaagcgtttgaggcacttctgtctagcacgcga
gcgccttacaaacctgcctatttgacgaggaaaggggtttgctag
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