Salvelinus sp. IW2-2015 (Arctic char): 111965747
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Entry
111965747 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965747
03036 Chromosome and associated proteins [BR:
salp03036
]
111965747
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111965747
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111965747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
HMG_box
SSrecog
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
111965747
NCBI-ProteinID:
XP_024002940
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All DBs
Position
LG6.2:complement(7235316..7251214)
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AA seq
714 aa
AA seq
DB search
MGDTLEFNEIYHESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSVATWRRVCLGH
GIKLATSNGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWXTAKFSGPLLS
FDVNDSSVFEXPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGTDPVE
AFAQNVRSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDLKIPYTTV
LRLFLLPSKDQRQMFFRCNCISLDPPIKQGQTRYHFLILHFSKEEELKLTLNMSEEEVEK
RYEGKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPL
ERGFIYVHKPPVHLRFEEISSVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLF
DFVNAKKLHIKNRGFKEAKNNEYSDSDDDQHDAYLERMKAEGKIREEGDGSNDSDEETDE
SFNPGEESDVAEEYDSNASESDSGSGGDGSDDEGKKKKPAKKAKVVKEKKERKPRREKKQ
KDTNAPKRPMSSYMLWLNASRERIKSENPGISITEISKKAGEMWKQIGKEDKEEWDGKAE
EAKKTYEKAMKEYRESGGGSSTPAKKESKKKAGGKKEDKKRKSGGGEKEKEQGGNDSFKS
REFISSEESSSDGERKKAKKAKKAKGKPQSRGKESEEEEEEAMTTPPSSAEDSD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagttcaacgagatctaccatgaatccaaggggtcctggaacgac
ggtcgtctgcggttcagtaagcagaatgtggtgtataagagcagtaagaccgggaaggtg
gacaacatcccggcagcagagctgtctgtggccacatggaggcgtgtgtgtctgggacac
ggcatcaaactggcaaccagcaacggccatgtctacaaatacgacggcttcagagacacg
gattatgagaggatctctgagttcttcaaggccaactacaaggtggagctgacagagaaa
gatatgtgcgtgaagggctggaactggngcactgctaaattctctggtccgttgctgtcg
tttgacgtgaatgacagctccgtgtttgagnatcccctggccagcgtgtcccagtgtgcc
acagggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccggccccgcagacgaggggacagaccccgtggag
gcgtttgcccagaacgtgcggtctaaggcagatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatatac
cctgccttcctgcacctccacggtaagacgtttgacctaaagatcccctacaccaccgtg
ctgcgtctcttcctgctaccaagcaaggaccagagacagatgttctttcgttgtaattgt
atcagtctggacccgcccattaagcagggacagacgcgttaccacttcctcatcctgcac
ttctctaaggaggaggagctgaagcttaccctcaacatgagcgaggaggaggtggaaaag
cgttatgaagggaagctcagcaagaatatgtcaggttctctctatgagatggtcagcagg
gtgatgaaggctctggtcaacaggaagatcaccgtgcccggaaacttccagggtaacacc
cctggggcccagtgtataacgtgttcctacaaggcccagtccggcctgctctacccgctg
gagcgaggcttcatctacgtccacaagcccccagtgcacctgcgcttcgaggagatctcc
agtgtcaacttcgccagaggcaccaccacaacgcgctccttcgacttcgaggtggagacc
aagcaggggaaccagttcaccttcagcagcatagagagggaagagtacgggaagctgttt
gactttgtaaacgccaagaaactccacatcaagaaccgagggttcaaggaggctaagaac
aacgagtacagtgactcagacgacgatcagcacgatgcctacctggagaggatgaaagcc
gagggcaagatcagagaggagggagacggcagcaacgactcagacgaagagaccgatgag
tctttcaaccctggagaggagagtgatgtcgctgaggagtatgacagtaacgcgtcggag
agcgacagcggcagcggaggggatggcagcgatgatgagggaaagaagaagaaacctgca
aagaaggccaaagtagtgaaagagaagaaggagaggaaaccacgcagagagaagaagcag
aaggacactaacgcccccaagaggccgatgagttcctacatgctgtggctcaacgccagc
cgagagcgcatcaagtcggaaaaccccggaatctccatcacagagatctccaagaaggca
ggagagatgtggaaacagatagggaaggaggacaaagaggaatgggacgggaaagcagag
gaggctaaaaagacctatgagaaagccatgaaggaatacagagagagtggtggaggctcc
tccacaccagccaagaaggagagcaagaagaaggcgggaggcaagaaggaggacaagaag
aggaagtctggtggaggagagaaagaaaaggagcaaggagggaacgacagctttaagagc
cgagagtttatctccagcgaggagagttcatctgacggtgaacgcaagaaagccaagaaa
gccaagaaggccaaaggcaaaccccagagcaggggcaaggagtctgaggaggaagaagag
gaagcaatgaccacaccccccagctctgcagaggactctgactga
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