Salvelinus sp. IW2-2015 (Arctic char): 111965778
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Entry
111965778 CDS
T05762
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111965778
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111965778
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
PQQ_2
TPR_9
Motif
Other DBs
NCBI-GeneID:
111965778
NCBI-ProteinID:
XP_023845831
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Position
LG6.2:8148546..8161052
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AA seq
1322 aa
AA seq
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MRNLRLLKSLRCSELQGPGTPQCFSVRTDTGTVLIASEYSVTELDPRAGQVMNEVSLTAE
RYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLSTNQLECVGSVNSGLTAMSWSPD
QELVTLTTGQDTIIMMTKNFEPIIEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPQTGARMVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKALLWNSDST
VLAVWLEDMTREEGGQVNTYIQLWTVGNYHWYLKQSLYFGSDPQXAPADVSWDPERPLGL
HLVTRGWASLTYDWGWSTDRSHGEDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYELQ
LPAPVNLVTFHRQPQRTNELAALTADGHILVYGQDTGDQSDPTARVGGFRSITHAPQLKT
TYRVLLEQEEPLALRLLLWLRGDVFLGVGGCAEGPSQSTLLILGPSEAQSPQSTLEIKSR
VEVEGHVISMCHSSNTGTVALQLEDGQIRKFLWDSLKPSVVGWQDVTGYSINFPDPCVQT
ALCTIEKEHLLGLTDRSHLFVDDTEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVK
GLQVALAADGGQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQ
LRKCLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPYPSNATGQSAPGACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPGAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEAVRALQAFVGSASW
RNALCVAEQIPLPPDQLALLARDLAEKLIELRRYTEAAILLEQYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQRAMFIRHKTRLAVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMSGSRAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKGLMLFQFDGQAGRLQQAYGEALQMIEV
ALPEVWQEGLQQSQAPITGPNSTANSIMASFQQPRPSSTQDSETPPPPKXRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgctcggagctgcagggcccgggcacg
ccgcaatgtttctctgttcggacagacacgggtacggtgctcatcgcttcagaatactcc
gtcaccgagttggacccacgagctggccaggtgatgaatgaggtgtcgttgacagctgag
cgctaccttccagaggatggcagtgggacagttgttggtatccaggacttaccagaccag
gagtctgtgtgtgttgctacagccactggtgatgtcatcctctacaacctcagcactaac
cagttggagtgtgtgggcagtgtgaacagtggtctaacagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcatagaggttgggatccatcaggatgactttggagaggggaagtttattaca
gtgggctgggggaagaaagagacccagttccatggctcagagggcaagcacgctgcccag
aagaagaccatagaggtgcagccagccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagatggccagctcttcgctgtgagctctgtttgcccccagactggtgccaga
atggtcagagtgtggaacagagaatgtgtcttgcagtcaacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttaatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaatggcctcctacacggggacttcacc
ctgccttttggaaaagaacaggtcaaggtgaaggcattgctgtggaacagcgactctact
gtgttggctgtgtggctagaggacatgacacgagaagaggggggccaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagagcctatactttggc
agcgacccccagrgggcgccagccgatgtgagctgggatcctgagaggcccctggggctg
cacctggtgacccgaggctgggctagcctgacctacgactggggctggagcactgaccgc
agccacggggaggacgggcaggacaacgctaacgtggctgtgatcgatggagacaaggtc
ctagtgtcgacatttcgtcagtgtgtggtgcccccacccatgtgtgcctacgagctccag
ctgcccgcccctgtcaacctagtgaccttccaccgccagccccagagaaccaatgagctg
gcagcactcaccgccgacggacatatcctagtctacggtcaagatactggggaccagagt
gaccctactgccagagtgggaggattccgatctatcacacacgctcctcagttaaagact
acctacagggttttgttggaacaggaggagcccctggctctgcgtctcctgctgtggctg
aggggggatgtgttcctgggggtggggggctgtgcagaggggccgtcccagtccacactg
cttatcctgggaccctcggaggcccagagcccccagtcaaccctggagatcaagtcacgt
gtggaggttgaaggtcacgttatcagcatgtgtcacagctccaatacgggcacagtggcc
ctgcagttggaggacggccagatcaggaagttcctctgggactccctgaagcctagtgtg
gtgggctggcaggacgtgacaggctacagcatcaacttcccagatccctgtgtgcagacg
gccctctgtactatagaaaaggagcatctgctggggcttacagaccgatctcacctgttt
gttgacgacacagaggtggcctccaacgtctcctcctttgtggtctacgatgacttcctg
ctactcaccacacactcgcacacatgccgctgcctccgactcagcacactcactgtcaaa
gggctgcaggtggccttggctgcagacggaggtcagaatgaccagaatgacgagactctc
cgcagggtggaaaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccaccatcgagcgctggtattggctcag
ctcagaaagtgtctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatttacgaccacaaccccaaggtgtttttagagagcgtggag
acattcctgagacagctagactctatcaaccacatcaaccttttcctcacagagctcaaa
gaggaagataccactacgacaatgtacccatacccatcgaacgctacaggccagtcagcg
cctggggcttgtgggaagaaggttgacattgtttgtgatgcgctacgctgcaccatggaa
tctatggaccaacacaagtactgcctgtctatcttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccggtgca
gccaacgcggtgagtgcggaggaggctctgaagtacctgttgttcctagtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtagctgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaatatgctgaagacwctagag
cccaactaccagcgctacaccatcgacaaacacctgaagagatacaggaaggccctgcac
cacctcagcaagtgtggtgaggagcacttcaccgaggccctaaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctatccaacagacagccctcagtacaaggccttg
agctgtgcctacgctgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggtgaggcggtccgcgccctccaggccttcgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagataccccttccacctgaccagctggcactgctg
gctagggacctggcagagaaactgatagagctcagaagatatacggaggcagccatattg
ttggagcagtatgctaaggactgtgaggaggccatctcggctctgatcacaggtgcagtc
tgggaagaagcacttcgactggtgtatttgtacaacagacaagacatcattgaaacaaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcctacctggaagctcagagr
gcgatgttcattcgtcacaaaacccgtctggccgtggtacgggagcttaaggaaaaggcc
aggctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagag
gccagtagtgtgatgtccggcagccgtgccggctccaagtactcacatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggctgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaggaggtgcacagcctgctgaagggcctgatgctgttccagttt
gacggacaggcggggaggctgcaacaggcctatggggaggctctccagatgattgaggtg
gcccttcctgaggtgtggcaggagggtcttcagcagagtcaggctccgattaccggtcct
aactccacagccaatagcatcatggcttcatttcaacagccaagaccctcatcaacccaa
gattcagagactcccccacccccaaagatsagaaatggtgtcaagtggaaactgagtatt
ttgaagtag
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