Salvelinus sp. IW2-2015 (Arctic char): 111965835
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Entry
111965835 CDS
T05762
Name
(RefSeq) platelet-derived growth factor C-like isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
salp04510
Focal adhesion
salp04518
Integrin signaling
salp04540
Gap junction
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111965835
04020 Calcium signaling pathway
111965835
09133 Signaling molecules and interaction
04518 Integrin signaling
111965835
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111965835
04540 Gap junction
111965835
09142 Cell motility
04810 Regulation of actin cytoskeleton
111965835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111965835
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Growth factors (RTK binding)
111965835
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
111965835
NCBI-ProteinID:
XP_023845941
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All DBs
Position
LG6.2:complement(12012504..12083696)
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AA seq
359 aa
AA seq
DB search
MVILNVSSTVFCNRCPPLIQMILPLLILFVSLLQQHGSEAESSHVSKFQQPSLKEQNGVQ
DSQHEKIITVVGEGMIHSPDFPFTYPRSTVLVWRLMASSDNRRIHLSFDQRFGLEDPEDG
ICKYDFVEIEEPSENTILGRWCGSQVPASHTSKGSQIRVRFISDEYFPSEPGFSIRYSLL
PISVLKPEVTPAPSLQSSDALSEAVAGLSTVEEVMKYLEPERWQQDMEDLYKPTWHILGK
SFLHNKKSRGVDLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCA
CCSHRCFDCQCVPTRVVNKYHEVLLLKHRSGGRGLQKSMTDVPLEHHEECACVCKDDWD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactaaacgtctcatcaacagtgttttgtaatcgctgtccgccactaatccaa
atgatccttccattattaatcctgtttgtatcgcttctccaacaacatggctcagaagct
gaatcaagtcatgtcagcaaattccaacaaccaagtttaaaggaacaaaacggtgtccaa
gattcccagcatgagaagataatcacagtcgtaggagagggaatgatccatagtccagac
ttcccatttacctaccccaggagtaccgtgttggtctggagactaatggcctccagtgac
aacaggagaatccacttgtcctttgaccagagattcggcctggaagacccagaggacgga
atatgcaagtatgattttgtggagatcgaggagccatctgagaacaccatcctgggccgc
tggtgcgggtcccaggtacccgccagtcacacgtccaaaggcagtcagatccgggtgcga
tttatctccgacgagtacttcccctccgagcccgggttcagcattcgctactccctgctc
ccaatcagtgtattgaagcccgaggtaactccagctccatctctgcagagctcagatgcg
ttgtctgaggccgtggctggyctcagcaccgtggaggaggtcatgaagtatctggagccc
gagagatggcagcaggacatggaagacctgtacaagcccacttggcacatcctgggaaag
tcrttcctccacaacaagaaatccagaggggtggatctcaacctgttgagagaagaggtg
agactgtacagctgcacgccgcgcaacttctccgtctccctgagggaggagctcaagagg
acggacgccatcttttggcctagctgcctcctggtgaagcgctgcgggggtaactgtgcc
tgctgctcgcaccgctgcttcgactgccagtgtgtgcccacccgggtagtcaacaagtac
catgaggttctcctgctgaagcaccgaagcgggggccgaggcctgcagaagtccatgacc
gatgtgcccctggaacaccacgaggagtgtgcctgtgtttgcaaagatgactgggactga
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