KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111965871
Entry
111965871         CDS       T05762                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111965871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111965871
   03041 Spliceosome [BR:salp03041]
    111965871
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111965871
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111965871
Spliceosome [BR:salp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111965871
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 111965871
NCBI-ProteinID: XP_023846027
LinkDB
Position
LG1:complement(32888643..32901394)
AA seq 371 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGYGDNDGYNNYGGNGGGYGGGPGGYSGG
NRGYGGGGGGGYGNQGGSYGGGGGYDNYNNGGGGGGSYRGGNYGASSGGGSSSGSGGGGG
GGGGGDYNDFGNYNSQSSSSYGPMKGGGGYSGGSGGGRSSGPYGGGGVGGGGGYGGGSGG
GYGGGSGGRRF
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgaaaccaccgacgagagtttgcggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgacgcatcaatggaggcccgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgctcac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagattgaagtcatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggcgga
tatggaggtggtttcggtggaggtagaggaggtggaggatatggtgataacgatggatac
aataactatggaggcaatggtggcggctatggtggaggtcctggcgggtatagtggtggc
aaccggggctatggtgggggaggcggcggcggttatggtaaccagggtggcagctatgga
ggaggaggaggatacgacaactacaacaatggaggtggtggtggtggaagctacagaggt
ggtaactacggagctagtagtggtggtgggagcagcagtggaagtgggggtggtggtggt
ggtggtggtggtggagactacaatgactttggcaattacaacagccagtcgtcctccagc
tacggcccaatgaaaggaggcggcggctatagcggcggcagtggagggggccggagcagt
ggcccatatggtggtggtggtgttggtggtggtggtggttacggaggaggctccggtggt
ggatatggagggggctccggaggtcgaaggttctag

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