Salvelinus sp. IW2-2015 (Arctic char): 111965935
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Entry
111965935 CDS
T05762
Name
(RefSeq) integrator complex subunit 5-like
KO
K13142
integrator complex subunit 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111965935
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
111965935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Nup96
Motif
Other DBs
NCBI-GeneID:
111965935
NCBI-ProteinID:
XP_023846132
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All DBs
Position
LG6.2:19908371..19911883
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AA seq
1015 aa
AA seq
DB search
MSGFFDGTLLTVTMQTSLAHSPQNAFSPKELSQEIKSFISGVDQTQGRKLSVREHACCAV
RLLRSVPACRGAVLEHLRGVYNEHVSAFLHNLEADGEGDGDSNLEXVITEVHGVLSEFIR
LNPRAWAPLVSTWAVDLLGQLSSKHAGRRAAPQSSSLNELLQLWMSCAATRSLMEAYTQC
LAAMIAWCPDQCVDSLLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLACGLKDFCSHGTA
DKGQGDKSNRVPKIGSVVGILGHLAARHSDSIRRELLRMFQESLSPPTIPPSSGSTSWEH
SAQLRQGAVPFLLQLAALSPSLLGAVSAELVESLRPPVLLQLQAVLQGLPRDELDNMMGL
VVHLIAQSPAGGARILRFLADTATPASVIISGPMPSPXEGVREACDRLLQMLLLHLHKLV
YTCSEGDDGYYNRPHSPSSQAPRVVPFLEELQSHVGELCAETLRLERKRHLWLHQLLCLL
SVYRGPSVATEALCQLLTLARNPDQLALAWQLHTPLSTCLPGLIPAAVTRCVAQIHTHTL
GPKQLCQLLLNLASTLQSVQEEERRGPGGMGGEGGARPQSSMAAQVGAAVSGHLHDFCPL
LLHGDPAVSHAAVWLLSRSLLPRAALPSHLLLVCRAAVTHFFLALRRRVQAGKGRDGGQG
GEAVNCSVLLLSHLAGYSPLTLKCVLLQLVEGALHKGNTDLFGGQSEDIGGDTPISPSLA
PDRGGSLLDINCRFGTTVNFSGSVWSVFHAGVIGKGLKQHSATPHPDAASVIQNVQTLLA
VTVQCCSAPSGNGGNSGGARHQSSVVPDELPPINAEAAKMMAVTLVEYICPDVANGELSW
PPEEHARTTVERDIHIRRCFEAHPVLFPLLHVVAAGRPALCYCSAVLRGLLATLLAHWEA
SREPLAVDSPWHLQASCMLVSCMGEGQLLPPVLGNVHEAFPYLMPFEVRLLLLAVWEYVR
GNGPMPQKFVFSAEKGLFCRDFARDGDVARYVAPIHSVLHKNIDRLGHLCWRFQL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttttttgacggaactctcctgacagtcaccatgcagacctctctcgctcac
tcaccgcagaatgcatttagccccaaggagctgtcccaggagatcaaatccttcatcagt
ggcgtggaccagacccagggtcgtaaactcagcgtccgtgagcatgcttgctgtgctgtg
cgtctactacgatccgtgcctgcctgtcgcggggcggtgcttgagcacctaaggggcgtt
tacaacgagcacgtatcagcctttcttcacaatctggaggcggacggcgagggcgacggg
gactccaacctggaggwcgtcatcacggaggtccatggcgtcctgtcagagttcatcagg
ctcaacccccgagcctgggctcccctcgtttccacctgggctgtagacctgctggggcag
ctgagctccaagcatgctggtcgcagggcagctccccaatcatccagcctcaatgagctg
ctgcagctgtggatgtcctgtgcagctacccgctccctcatggaggcctatacccagtgc
ctggcggccatgatagcctggtgtcctgatcaatgtgtggacagtctrctggacacctct
gtgcagcactccccccactttgactgggtggtggcccacatcggatcctccttcccgggc
accatcattagccgcgtcctggcctgtggccttaaagacttctgttcccacggaacggct
gacaagggtcagggagacaagagcaaccgagtgcctaagatcggctctgtggtggggatc
ctgggccacctggcggcgcggcactctgacagcatccggcgggagctgctgaggatgttc
caggagagcctcagtcccccgactataccccccagctctgggtccacctcctgggaacac
tcagcccagctccgccaaggcgcagtgcccttcctcctccagctggcggcgctgtcaccc
tctctgctgggcgccgtgtctgctgagctggtggagtctctacggcctccagtcttgctc
cagctccaggctgttctacaggggcttcccagggacgagctggacaacatgatggggctg
gttgttcacctcatcgcccagagccctgctggaggggcacgcatcctccgcttcctcgct
gacacggccacccccgcatccgtcattatctccggcccaatgccttcccctcasgagggg
gtccgggaggcctgcgaccgtctcctccagatgctcctgctgcacctccacaagctggtc
tacacctgctcagagggggacgatggctactacaaccgcccccactctccctcctcccag
gccccccgggtagtccccttcctggaggagctgcagtcacacgtgggagagctgtgtgcc
gagacattgaggctggagaggaagcgccatctctggctgcaccagctgctgtgtctgctg
tctgtgtacaggggccccagtgtggccacggaggccctctgtcagctgctcaccctggcc
cggaacccagaccagctggccctggcctggcagctccacaccccgctgtccacctgcctg
ccaggcctcatccctgcagcagtgacccgctgcgtggcccagatccacacacacaccctg
ggacccaagcagctctgccagctcctcctcaacctggcctccackttgcagagtgtacag
gaggaggagaggaggggtcctggaggcatgggaggagaaggaggtgcgagacctcagtca
tccatggcagcycaggttggagcagcggtctcgggacacctccatgatttctgccctctg
ctcctccacggtgacccggcggtatcccacgctgccgtgtggctcctgtcccgcagcctc
ctcccccgtgccgccctgccttcccacctgctgctcgtctgtcgggccgccgtcacacac
ttcttcctggcgctgcggaggagagtacaggcagggaaggggagagacggagggcaggga
ggagaggcggtgaactgttcggtgctcctcctgtcccatctggcaggttactcccctcta
accctcaaatgtgtcctgctgcagctggtggagggagctctacataaaggaaacactgac
ctgttcggagggcagagcgaggacattggaggggacacccccatctccccgtccttggcc
cctgaccgggggggctccctgctggacatcaactgcaggttcggcactacggtcaacttc
tctggcagtgtgtggtctgtgttccatgctggggtgatagggaagggtctgaagcagcac
agcgctacgcctcaccccgacgccgccagtgtcatacagaacgtccagactctgctggct
gtcaccgtccagtgctgcagcgctccatctgggaatggtggcaacagtggcggcgcccga
caccaatcctctgtcgttcccgacgagctgccgcccatcaacgctgaggcggccaaaatg
atggcggtgacgctggtggagtatatctgccccgacgtggccaacggggaactgtcatgg
ccaccagaggaacacgcccgcaccactgtagaacgcgacatacacatccgccgctgcttc
gaggcccaccctgtcctcttccctttactccatgttgtggctgccgggcgtcctgctctc
tgttactgttctgcggtgctccggggcctgctggctactctgctagcccactgggaggct
tcgagggagcctttggcagtagactccccctggcacctccaggcctcctgcatgctggtg
tcatgtatgggcgagggccagctgctgccccccgtgctgggcaacgtccacgaggccttc
ccctacctgatgcccttcgaggtgaggcttctcctcctggctgtgtgggagtacgtgagg
ggcaatggccccatgccacagaagtttgtcttcagtgccgagaagggcctgttctgccgg
gatttcgcacgggacggggacgtggcaagatacgtagcgcccatccacagtgtcctgcat
aagaacattgaccggctggggcatctatgctggcgtttccagctctga
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