Salvelinus sp. IW2-2015 (Arctic char): 111965956
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Entry
111965956 CDS
T05762
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136
Autophagy - other
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111965956
04136 Autophagy - other
111965956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111965956
03029 Mitochondrial biogenesis [BR:
salp03029
]
111965956
Membrane trafficking [BR:
salp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
111965956
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111965956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
111965956
NCBI-ProteinID:
XP_023846156
LinkDB
All DBs
Position
LG6.2:complement(20131296..20154551)
Genome browser
AA seq
2018 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLEQLSLDLYNGSGVIKEINIDVWAVN
ELLESLGAPFEIVDGFVSSIEVTIPWSALVTDHCTLVISGLQITCRPKYRSSGGLDSQGW
STCMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTLLDTIVRIEHQ
RLDMETGIALEVHIKRLEYCDEAVRDPSQTVPVDIHQPPAFLHKILQLSSVQLLYETTGG
PQGPLRADTPASASASEEEEEEEEEEGGEDNEEEEGGEEEEGGEEEGDPPAAQQPLLIGS
CSGFMETTVKIKQNDMLPGPKLELDGKVGCLHLLLSPDQITHLTDLLSALCIDTEPKPSG
AGVHSRPLDSEDLRLIEEDLSKQLSSSPGDRDPDWDEEPDMEPYLTGLENGDMFFSMGPG
MTSSVTSARSLSDSMASSTHSQASYAQGLPQGPRRYPVPGSLSSLPQCSRIPGRSSQSEP
LKPEVLLRLSLGGLTLTLLEQDPPPGLDTASSLAQVSQVFFRELAFFKDSMFSERDFHHL
RASFAKACPHSHLRMTGAAVQVACEMRSAGRHSRAVTSDLSFSRLELLECLWEPGKPQYT
ELLHFQRAGMFTVGATARPCAQLHYSLTEKHLRKGRQRVLRRDSVVRVELGELSAELDLD
ILSRLEPLSRACSHCPTQTGGGPVHTQTQSSELHSSLSLLSPHAILKLRFPIPDLRPYPL
RRPPSQRAVRQENLVLELCDLDIRSQEGPDLQPDPHSPPGPSHGSLTQLLEASFSDMHGT
YEGWEGGSFPCIRVKKSQDSMAKLSVRVSGGEGLGSALGGVGVGLMRDLGSMSFENPCEL
REKTSSPFSSNRTMFETDEMVIPADPEEMQHFQSQCVSQCVVDVSLPLAYIFLPSKQAFQ
SVYNRINNDLLMWEAPPPSDPKSDHSSQHRRQDNDYFHLCKSAFKLDSDSEEEDAQFYTD
SVSARCGQLEPRPNHDLSLLSLTIVIGKGRLQAMTDSKGETGSQEDRCHGELMLDLEGGK
MFSVAQHQNNPHLSFLCLESRRVELYHKAVVKDSPVPRRLEMPSFTPPGHLDPTIYPTEV
GVSSVKGRETEVHMLSTAFKITLDPQRNVKEFLVALRLHGATMRHQMAQTNHSWHEQLVD
FLDVIDDPILGYTSPAVITVLHTHLATCAVDYRPLYLPLRVLFTAESFSLSSNIIVDTAT
FHLRFILDDSALYLSDKCESDVVDLRRDYVCVLDIDLLELAITTWKGSDTGKLSQPLFEL
RCSNNVVHLHTCADSCAALVNMLQYLVSQGDLHPPPRHTSPTEIAGQKLPLSECPASLPP
CPPAETAEINQCDLLDALIDTERSHPDEDMDSGSPTVPRGSPVSVYLFPGEAPKLPPPVV
IDGEESELDGLVVTATEVQADMMSEEGSEGSEDNEDFCILEAPGMGIPPRDGEPLVTVLT
EGPIRVREGHFSRPRGSSDLLRAPSHFPVPQSRVVLREVSVVWHLYGGRDFGGKAMSTHT
QHGNRGRSAPSGMRGSPSRSAAPSRPQNSWRWAGGGGRQHNLLMEIQLTKVSFQHESYPV
VVSAAGPCQEGGVPGVGVGAVGEQPLSRQVFIVQELEIRDRLASSQLNKFLYLYTSESMP
RRAHSNMLTVKALQVCPDSGVGGPECCLRISLLPLRLNIDQDALFFLKDFFSSLAAGVNP
YLPMDPAAEVKTDPSQKPTEDGVIGTETTSGLGPDLTASVETTYSEQSSSSAGSTSSTDQ
PIYFREFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGV
DKVIQYAVTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWMPIEQYRRDGRIIRG
LQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLNRYITEGRPPSNQPRR
AHQPADLREGVAKAYDTVREGMMDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRP
LIVASEATSNLLGGMRNQIKPDARKEDFLKWRSDEGQE
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcaggctcaatcaagaagcgggcctgtcggtacctc
ttacagcattacctcggtcacttcttgcaagaacgactgagtttggaacagttaagtttg
gacctgtacaatggtagtggtgtcatcaaagaaatcaacatcgacgtttgggcggtcaac
gaactcttggagtctcttggggctccatttgagattgtggatgggtttgtgagcagcata
gaggtgacaattccctggtcagctcttgtcaccgaccactgcaccctcgtcatctcaggc
cttcagataacatgcagacccaagtacaggagcagtggggggttggactcccagggttgg
tccacatgcatgacctccagcatgcagctggcccaggagtgtctaaaggacccccctgag
gcgtcagaggagccgcccgctccactggagggcctggagatgtttgcacaaactattgag
actgtcctgcgtcggatcaaagtcaccctcctggacaccatcgtccggatcgagcaccag
cgcctggacatggagacgggcattgccttagaggtgcacatcaaacggctggagtactgt
gacgaggcagtgagggaccccagccagacggtgcctgtagacatccaccagccgcctgcc
ttcctgcacaagatcctccagctcagctctgttcaactgctgtacgagaccaccggaggg
ccccagggtcctttaagagcagacacccctgcctcagcctcagccagtgaagaggaggag
gaggaggaggaggaggagggtggtgaagataatgaagaggaggagggtggtgaggaggag
gagggtggtgaggaggaaggtgaccctccagccgcccagcagcccctcctcatcggcagc
tgttctggcttcatggagaccacggtcaagatcaaacagaacgacatgctgcctggacct
aagttggagctggatgggaaggtgggatgcctccacctgcttctctccccagaccagatc
actcacctgaccgaccttctgtctgccctctgcatcgacacagagcctaagcccagtggt
gctggggttcacagccgtcccctggactctgaggacttgcgtctgatagaggaggacttg
agcaaacagttgagctccagccccggagatagagatccggactgggacgaagagcctgac
atggagccctacctcaccggtctggagaacggggatatgttcttctccatgggtcctggt
atgactagcagtgtgacgtccgcgcgctctctctccgacagcatggcgtcgtctacacac
agccaggctagctacgcccagggcttaccacagggtcccaggcgttatcctgtaccagga
tcactatccagcctgccccagtgtagcagaataccagggcgaagtagccaatcagagcca
ctgaagccagaggtgttgctccgcctctcgcttggcgggctcaccctaaccctactggag
caggacccgccccccgggctggacacagcttcctcattagcccaggtgtctcaggtgttc
ttccgggagctggccttcttcaaagacagcatgttcagcgagagagacttccaccacctc
agagctagctttgctaaagcctgcccccactcacacctcaggatgactggagcagcggta
caggtggcgtgtgagatgcgcagtgcaggtcgccactctcgtgctgtgacctctgacctg
tccttcagtaggctagagctgcttgagtgtctctgggagccaggaaagccccaatacact
gagttgctccacttccagcgtgctggaatgttcacagtgggagctacagccagaccctgt
gcacagctacactacagtctcacagagaaacacctgcgcaaggggaggcaacgtgtgttg
cgtagagacagtgtagtgagggtagagttgggagagctgagtgctgagttggacctggac
atactgagtcgactggagcctctgagcagagcctgcagccactgtcccacacagacagga
ggaggacccgtccacacacagacccagagcagtgagctgcactcctctctctccctcctc
tcgccccacgccatcctcaagctccgcttccccatcccggacctccggccgtaccccctc
cgacgcccgccttcccagagggctgtgcggcaagagaacctggtgctggagctgtgtgac
ctggatatccgctcccaggagggccctgacctacagccggatccccattcaccccctggc
ccctcccatggctccctcacacagctactggaggccagcttcagtgacatgcacggaacg
tatgagggctgggagggaggctccttcccctgtatcagagtcaagaagagtcaagactcc
atggccaaactgtcagtgcgtgtgagtggaggagagggtctggggtcagcattagggggg
gtaggggtgggtctgatgagggacctggggtccatgtcgtttgagaacccctgtgaactc
cgagagaagaccagctctcccttctcctccaaccgcaccatgttcgagactgaygagatg
gtgatcccagcagacccagaggagatgcaacacttccagtctcagtgtgtgtctcagtgt
gtagtagacgtctctctgcccctggcctacatcttcctgcccagcaaacaggccttccag
agtgtctacaacaggatcaataatgacctgttgatgtgggaagcccctcccccctcagac
cctaagagcgaccacagctcccaacaccgtcgccaagacaatgactatttccatctttgc
aagtctgccttcaaactagactcagactccgaggaggaagatgctcagttctacacagac
agtgtatcagccagatgcgggcagttggagccccgccctaaccacgacctcagcctgctc
tccctcaccatcgtcatagggaagggccgcctccaagccatgacggacagcaagggagag
acaggaagtcaggaggaccggtgtcacggggagctcatgttggacctggaagggggaaag
atgttcagcgtggcgcagcatcagaacaacccccatctcagcttcctgtgcttggagagc
aggagggtggagctttaccacaaagctgtagtgaaagactcccccgtccctaggcggtta
gaaatgcccagcttcactcccccagggcatctggaccctaccatttaccccacagaggtg
ggggtgagcagtgtgaaaggcagggagactgaggtccacatgttatccacggctttcaaa
ataaccctggaccctcagaggaacgtcaaggagttcctggtcgcccttcgtctccatggc
gccactatgcgacatcagatggcacagaccaatcacagctggcacgaacagctggttgat
tttctggatgtcattgatgacccgatcctgggctacacatctcctgcagttattaccgtc
ctacacacacacctggccacctgtgccgtggactacaggcccttgtatcttccattgagg
gtgttgttcacagcagaatccttctctctgtcgagtaacatcatcgtagacactgccacc
tttcacctcaggtttatcctggatgactctgcactgtatctctctgataaatgtgaaagt
gatgttgtggacctgagacgagactatgtatgtgttctggacattgatctgctggagctg
gccattaccacatggaaaggcagtgatacagggaaactgtcccagcctctgtttgagctg
cgttgctccaacaacgtggtccacctccacacctgtgctgactcctgtgctgccctggtc
aacatgctgcagtacctggtctcccagggagacctgcacccacccccccgacacacatca
cccactgagatcgctggacagaaactgccgttgtcagaatgtcccgcctccttgccaccc
tgccctccagctgagactgctgagatcaaccagtgcgatctccttgatgctttgattgac
accgagaggagccatccagatgaggatatggactcgggttctcccacagtcccgcggggc
tcacctgtctctgtctacctgttccccggggaggctcccaagctccccccacctgttgtc
attgacggggaggaatcagagcttgacggactggtggtgacagccactgaggtgcaggcg
gatatgatgtcagaggagggctctgagggttcagaggacaacgaggacttctgcatccta
gaggctcctgggatgggtatacctcccagagacggggagcccctggtgacggtgctaact
gagggtcctatcagggtgagggagggccacttctcccgaccgcggggcagctctgacctg
ctgcgggcccccagccacttccctgtcccccagagcagggtggtgctacgagaggtgtct
gttgtctggcatctgtacggagggagagatttcgggggcaaggccatgtctacacacacg
cagcatggaaacaggggtcgctctgccccctctgggatgcgtgggtccccgtcccgctcc
gctgctccgtcacggcctcagaattcttggcgttgggctggaggtggtggacgacaacac
aacctgctcatggagatccagctcaccaaggtgagcttccagcacgagtcgtatccggtg
gtggtgtctgcggctgggccgtgtcaggagggaggggtgcctggggtgggggttggcgcg
gtgggcgagcagcctctgtcccgccaggtgttcatcgttcaggagctggagatacgcgac
cgcctggcctcgtcccagctcaacaagttcctctacctgtacacaagcgagagcatgcct
cgcagagcacactccaacatgttaacagtgaaggccctgcaggtgtgtccagactcaggt
gtaggtggtccagagtgttgtttaagaatcagcctcctccccctccgactcaacatcgac
caggatgccttgttcttcctgaaggatttcttcagtagtctggctgctggagttaacccc
tacctgcctatggatcctgcagctgaggtaaagacagacccttctcagaagcccactgaa
gatggggtcattggcacagagaccacttctggtctgggtcctgacctcactgcttctgta
gaaaccacctatagtgagcagagctcctcgtccgctggctccacctcttccactgatcag
ccaatctacttccgggagttccgtttcacctctgaagtccccatctggcttgactaccag
ggcaagcatgtggtcattgagcagggaacgtttgcagggattcttattggtctggcccag
ctgaattgctctgaactgaagctgaagagactctgctgccgacacggacttctaggtgta
gataaggtgattcagtacgctgtcactgagtggctgacagacatcagaaagaaccagctg
ccgggcattctgggaggtgtaggccccatgcactctgtagttcagctgttccatggagtg
agggacttgttctggatgcccatagagcaatacaggcgggacggccgcattatccggggt
ctccagcggggggcagcatccttcggtacctccactgcctctgctgctctggagctcagc
aacagactggtgcaggccatacaggccacagcggagactgtgtatgacatcctatcccca
acgccccccctgaaccgttacatcacagagggccggccgccctccaaccagccccgccgc
gcccaccagccggccgacctcagagagggcgtggctaaggcctatgacactgtcagagag
ggtatgatggacacagctcaaacgctatgtgacgtggcgtctcgcgggcatgagcagaaa
ggtctgcctggtgctgtgggcggagtcctgcggcagatcccgcccaccgtcgtccgtccc
ttaatagtggcgtccgaggcaacgtccaacctactggggggcatgcggaaccagatcaag
ccagatgcacggaaggaggacttcttaaaatggcgctccgacgaaggccaagagtga
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integrated database retrieval system
