Salvelinus sp. IW2-2015 (Arctic char): 111966017
Help
Entry
111966017 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111966017
04120 Ubiquitin mediated proteolysis
111966017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111966017
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111966017
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111966017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
111966017
NCBI-ProteinID:
XP_023846234
LinkDB
All DBs
Position
LG6.2:24034966..24045579
Genome browser
AA seq
627 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLAILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAPGATEVPGATEAAQTQGAGTG
QSTGASTVGAAPAPGGPMPGFPFPSFPPPPFPSPPWLTMPPPPPFVSSMPPPPPALSTMS
EAELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEA
SGSSPPSTSAETQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDKRDEEEGDGEEVG
DDGEPNPSELRRRRLRKLETTPPPPDH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagcctggctctgaccggcgctgtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgtttctgttggggaagttc
atgcgtaaagtcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgttcagggacgacttctct
ccccgcttcgttgccctattcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgctctctctgatggtgttgctggcaatcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccaactagtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacactgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggttcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagcagtaaca
gatgccataatgtcgcggcgagccatccgcaacatgaatacactttacccagatgctact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtgact
ggagccaagaaacttccttgcaatcatatcttccactctagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaat
cagccccccaccccagcccctgcccagccccctgccccagcagcacccgccaacgcccct
gtccctggaccacctgggaatgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctcctggcgcccca
ggagccacagaggtccctggggccacagaggcagctcagactcagggagctggcacgggt
cagtccactggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctggg
ttccccttcccctccttcccacccccaccgttcccctcacctccatggctgactatgcca
ccacctccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtca
gaggctgagctgagggagctggagcaggagggccgtagaggcctggaggccagactgcag
tgtctccacaacatccacactctactggacgctgccatgctcaacatccaccattacctc
actaccgtcgccacgctcactcctcctcagtcagaaaccagcagcgctgctggcgaggcc
agtggatcatctcctccctccactagtgcagaaacccaggagaatgactctcagagcagt
acagccgctgaaccrgaagctgtgaatggggccacaggtttctcccagccagactctacc
acyttgggcgacagtgaagacaagcgcgatgaagaggaaggagatggagaggaagtcggc
gacgacggagagcccaacccttcagagctgaggcgccgtcgtctccgcaaactcgagacc
acaccccctcctcctgaccactga
DBGET
integrated database retrieval system
