KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111966041
Entry
111966041         CDS       T05762                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03020  RNA polymerase
salp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111966041
  09124 Replication and repair
   03420 Nucleotide excision repair
    111966041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salp03021]
    111966041
   03019 Messenger RNA biogenesis [BR:salp03019]
    111966041
   03400 DNA repair and recombination proteins [BR:salp03400]
    111966041
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111966041
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111966041
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111966041
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 111966041
NCBI-ProteinID: XP_023846255
LinkDB
Position
LG6.2:complement(25972524..25978510)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcatatttccctggagcatgagatcctgctccaccctcggtactttggtccc
aatctcctgaacactgtgaaacagaagctcttcacagaggtggagggaacatgcacagga
aaatatggattcgtcattgcggtgaccaccattgacaacattggtgcaggtgtcatccaa
ccaggcaggggatttgtgctttaccccgtcaagtacaaggctattgtcttccgtccattc
aaaggcgaggtggtagatgccgtggttacccaggtcaacaaagttggactgttcacagag
atcggccccatgtcctgtttcatctctcgtcattccattccctcagagatggagtttgac
cccaactcaaatcctccctgttataagaccactgatgaggacattgtaatccaacaggat
gatgagattcggttaaagatcgtgggaacaagagtggataaaaacgacatttttgctatt
ggatccctcatggacgattacctgggtcttgtcagctga

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