Salvelinus sp. IW2-2015 (Arctic char): 111966081
Help
Entry
111966081 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111966081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111966081
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111966081
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111966081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-RING_10
zf-RING_11
Prok-RING_4
RNase_E_G_Thio
zf-rbx1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111966081
NCBI-ProteinID:
XP_023846277
LinkDB
All DBs
Position
LG1:complement(33661911..33683276)
Genome browser
AA seq
939 aa
AA seq
DB search
MSDVEDMDTSTTEMNRNNEVSGPEQQRPHDLSQIQILVPTGTSSGPVTVIQSQPQRSSVS
QSAFTYKAETSEDVSEDASSSARDTADRYSETFGGGTPSATCVNFPSSDNDPDLYQADND
FKVKHPSAPLYDPRHYGNPQLSSFKEMSVDSPAEGDNGSARNKQSQRDQHSPINPQSTHD
VDLNRAKDETEEKQNTGPLDEATVYVSVEWPGKAILSWKSTLQKSLQSWLNNNFKETECT
VERLNXNLAEVKIHPPSVVEDLLKRKETQVTFKDKAKTSATVRFHRAIPPACKPWFQSNS
NPSSMEVLPPTSAHMPQDVKLPITVSASIDIGGYKPEVRAALLRHYHTTDHKLAVKGSFD
EVNQFYRELTKIVREAETEPEADWNDNAEAAQSMTHNGMKTHEDPGQKEMTFPVPLIHFV
YLNQAYRKEMEDIEKRNGVKINAEVKVSIKEDTQKTGRDFMLTKAHQEFSDLFQKCVVDL
DSISTHLTPGDPGDLMNTLKNIQNEETRLVLNVSANGCVVFGPAQSIMAVGKAFGMKTTV
MTFGMDHSSTEKASGFAGGPVLRSPKTPRMIGMDIKDPLLSHGLAMDQTHWDLMKSAFRE
KITAIKNKFGVDFMEEKSPGKVKIKTRPTTSHXPQAVSLESHAIRALMHFYQKVATSAMS
CHLLDPTHAKTVGDKLEEIHPRHRCVWAGENYGPWRLIGLPQHLGPAVKELEMXLKMPMF
KEEDKHKIEYPGDRSSTGAATGGAVGDGGATGGPEDDNCSICMDRFINKTKLSCSHEFCT
DCLRKAVEFSGPSCPLCKDMFGKVEGDQPEGTMKVKHESYPCIPGYRGYGMIVIXYDIPS
GKQTKKHSNPGKGFIGANRIAYLPDNQEGNXVLKLLERAFDQKLIFTVGTSRTTGTDDCV
TWNDIHHKTNIDGGAQGFGYPDPDYLSRVKNELKAKGIE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtagaggacatggatacatcaaccacagagatgaacagaaacaatgaagtc
tctggaccagaacagcaacggccccatgacctttcgcaaatacagattcttgtgcccaca
ggaacatccagtggccctgtaacagtgatacagtcacagcctcaacggtctagtgtttct
caaagtgcttttacttataaggcagaaacatccgaggacgtgtctgaagacgcaagttca
tcagcccgagatactgccgatcggtactctgagacttttggaggagggacaccttcagca
acctgtgttaatttcccaagctctgataatgacccagacctgtatcaagcagataatgac
tttaaggtgaagcatccctcagcacccctgtatgaccccagacactatggcaatcctcag
ttatcctctttcaaagagatgagtgtggattctcctgctgaaggagataatggctctgct
agaaacaaacaatcacagcgagatcagcattctcctatcaacccccaaagcactcatgat
gtggacctgaatcgggcaaaggacgagaccgaggaaaagcagaacactggacctttagat
gaggctacagtctatgtcagtgtggagtggcctgggaaagcaatattgtcatggaagtct
acacttcaaaaaagtctccagtcgtggttgaataataactttaaagaaacagaatgcacc
gtggaaaggctgaacrgaaacttggcagaagtcaagatacatcccccatcagtcgttgag
gaccttctgaagcggaaggaaacacaggtgaccttcaaagacaaggccaagacatcagcc
actgtgcggtttcacagggctataccaccagcatgtaaaccctggtttcaatcaaacagt
aatcccagctcaatggaagtcttgcctccaacatccgcacacatgccacaggatgtcaaa
ctcccaataactgtaagtgctagcattgacatcggtggctacaaacctgaagtacgggct
gcccttctccgtcattaccacaccaccgatcacaagttggctgtaaaagggagctttgat
gaagtgaaccagttctacagagagttgaccaagatcgtcagggaagcggaaaccgagcca
gaagcggattggaaygataatgcagaagcggcacaaagcatgactcacaatggaatgaag
acccatgaagaccctgggcagaaggaaatgacctttccagtcccactgatccactttgtg
tacttgaatcaggcctaccggaaggagatggaggacatagagaaaagaaatggagtcaaa
atcaatgcagaagtgaaggtgtccatcaaagaggacacacagaaaacaggcagagatttt
atgctgaccaaagcccaccaggagttcagtgacctcttccagaagtgtgtagttgatttg
gacagcatttccacccatctgacacctggggatccaggagacctcatgaatacgctgaaa
aacatccagaatgaggagaccaggctggtactaaatgtgtctgccaatggctgcgttgtg
tttgggccggctcagagcatcatggcagtcgggaaggcttttgggatgaagactacagta
atgacatttggaatggatcacagctccacagagaaagcatctggatttgctggaggacct
gttttgagatctccaaaaacaccacggatgattgggatggacatcaaagatccacttttg
tcacatgggctggccatggaccagactcactgggatctaatgaaatctgcctttcgtgag
aaaataacagcaatcaaaaataaatttggagtggatttcatggaggaaaagtctccaggc
aaggtaaaaattaaaaccagacctacaacatcacacamtccacaggcagtctccctggaa
agccacgccatcagagctctcatgcacttctaccagaaggttgcgacatcagcgatgagc
tgccacctgctggaccctacccatgcaaagactgtgggggacaagctggaggagatccac
cctcgacaccgctgtgtctgggcaggagaaaactatggtccctggaggctgatcggccta
ccgcaacatttgggccctgctgtcaaagagctagagatgatrctgaaaatgcctatgttt
aaagaagaagacaagcacaagattgagtatcctggagacagatccagcactggagcagcc
acggggggagcagtcggagatggaggagccacaggagggcctgaagatgataattgctcc
atatgcatggacagatttatcaacaagacgaagttgtcctgcagccatgagttttgtaca
gattgtctgaggaaggcagtggaattctcaggccccagctgtcctttgtgtaaggatatg
tttggaaaggtggagggagaccagcctgagggaacaatgaaagtgaaacatgaaagttac
ccgtgcatacctggataccgtggctatggcatgatagttatcamctatgatataccaagt
ggaaaacagacgaagaaacattccaaccctggaaaagggttcattggggccaatagaata
gcttatctccctgacaaccaggagggcaacraagtgctgaagttactggagagagctttc
gaccagaagctgattttcacagttgggacctccagaaccactgggacagacgactgtgtg
acatggaaygacattcaccacaagaccaacatcgatggaggggcacaaggttttggttac
cctgaccctgactacctgagcagagtgaagaatgagctgaaagccaaaggcattgaatga
DBGET
integrated database retrieval system
