Salvelinus sp. IW2-2015 (Arctic char): 111966171
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Entry
111966171 CDS
T05762
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111966171
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
WW
MAGI_u1
DUF6288
Motif
Other DBs
NCBI-GeneID:
111966171
NCBI-ProteinID:
XP_023846359
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Position
LG7:613961..756750
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AA seq
1469 aa
AA seq
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MSIEDFLNLEQCGALLEIGTYEGNYYGTPKPPRQPVVGSVILSDAVLLDGSQQSTPKHTK
SYNDMQNARVVPADYEDDDQATEMNNSFTGSLVRSLFPSPLLCTGNPSDQDESRGGVLRP
YPARENAPSYGLNNVAASTSDNGQQTHAQPQASPEDPLGPLPDNWEMAYTENGEVYFIDH
NTKTTSWIDPRCLEKPLKPLEECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDH
INRKTQYENPIVEARRRMQLEQQQPQPPEGERYIREWIEEHSSAGAPLANYANNHLETYR
DPQVPPPLPPAPGGAKRGKPFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQ
IKSLVLDGPAAVDGKMETGDVIVSVNDTIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYP
LPFDPDDPNTSLVTSVAILDKEPIIVNGQESHDSPSSHGSQTGGPVNGMREPRAHSPSAE
VVSNGSHGYSSSDVVTLASSIAGQPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDY
PRCRGLKESDILMEVNKRNVQNMSHNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVQ
QLERKDSQSSSQHSVCSHRSTHTDSPSHPPSNMPSEAMAPPPAAPTQPLPGLPPLPTQDP
GDGTITLQKKPDPFKIWAQSRSMYESRQTDCQEQEIFLWRKDTGFGFRILGGNEPGEPIY
IGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSS
GYGVSKGEGDVPPSPASSHHSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGG
GGSGSAVVTAALQPYDVEIQRGENEGFGFVIVSSVSRPDAGTTFAGNACVAMPHKIGRII
EGSPADRCGKLKVGDRILSVNGCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLL
TNAEKIATITTTHTPQTAMEPRNNSKSKQAPPPPPPTKAQTSQDAEFYSVDLERDSKGFG
FSLRGGREYNMDLYVLRLAEDGAAVRNGKMGVGDEILEINGESTKNMKHARAIELIKNGG
RRAHLLLKRGDGSVPEYDSSHDGHSPTPRAQNSPEVRTLPPNSRYHPSSESSYPPDLHKP
SRHKDAAQGRDRDRVEHQGRHFNPHHHHTWNNNHSHTTPSQHYPENSGGNNKKSRGRKVN
KSESESGISKLLKTLRKDSSGKKAAAAAAATERERELSASSSTLDPRYSRPRRGSLDRSP
TRKHNASPDRRRAKSMDRRAERAHRDRTPEKENEDGGFLSHAATPEQPLYDRRLVSEPQT
PGRAYLEATTPERLNKRASSLSLSRGWTPERGSLKNGNLRRDSPVETREERYGMNGTPER
RYRSERDSSPDSSYSREERNYYSTLKNNASTHNHAGYNNAGHCNNAAGHNSAAGHNNAAG
HNNAVGRAQNQFPEPMRRLYKESPKDLSI
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagaggacttcctaaatcttgagcagtgcggagcactattggaaatagggacg
tatgaaggtaactattatgggacccccaagccgccgaggcagcccgtggttgggtcagtg
attctcagtgatgctgtgctcctcgacggctcccagcagtccactcccaagcacaccaag
tcctacaatgacatgcaaaacgcccgagtagtgcctgctgactacgaggatgacgaccag
gccacggaaatgaacaacagttttacaggatccttagtgcgtagtctcttcccctctccc
ttgttgtgcacaggtaaccctagcgaccaggacgagagccgcggcggcgttctccggcca
tatcccgcgcgcgagaatgctccgtcctatggtctgaacaacgtggccgcctccacctcg
gacaacgggcagcagacgcacgcccagccccaagcctctcctgaagaccccctgggaccc
ctgccagacaactgggagatggcctacaccgagaatggagaagtctactttatagaccac
aacacaaagaccacatcgtggatcgacccccgctgtcttgagaaacctctgaaacctctg
gaagagtgtgaggatgatgaagaaggggtacatactgaggaaccagacaatgaactagaa
ctgcctgcaggatgggagaagatagatgacccagtgtatggggtgtactacgtagatcac
atcaacaggaagacccagtatgagaaccccatagtggaggctaggcgcaggatgcagctg
gagcagcagcagccgcagcctcctgaaggtgagcggtacattcgagagtggatagaggag
cactcctcagctggtgctcccctggccaactatgccaataaccacctagagacgtaccgc
gacccgcaggtcccgcccccgctgccccctgctccgggaggggccaaacgagggaagcca
ttcttcacacggaacccagcggagttgaagggaactttcatcaacaccaaactgaagaag
agccgccgcggattcggcttcaccgtagttgggggcgacgagccggatgagttcctgcag
atcaagagtttagtcctggacggtcctgctgctgtggatgggaagatggagacaggtgac
gtgatagtgagtgtgaacgacaccatcgttctgggctacacccacgcccaggtggtgaag
attttccagtccatcccgatcggctccatggtggacctggccctgtgccgcggctacccc
ctgccctttgaccctgacgaccccaacaccagcctggtgacctccgtggccatcctggac
aaggagcccatcatcgtcaatggccaggagagccacgactctccgtccagccacggcagt
cagaccggagggcctgttaacgggatgagggagccgcgggcccacagtccctcagcagag
gtggtgtccaacggctctcacggctactcctccagcgacgtggtcaccctggcatcatcc
atcgctgggcagccagagctgatcacagtgcacatggagaaaggcgataagggctttgga
ttcaccatcgctgacagcctgacgggagggggtcagagggtgaagcagatcgtggattac
ccccgctgcaggggcctgaaggagtcagacattctgatggaggtgaacaagaggaatgtc
cagaacatgagccacaaccaggtggtggacctgctcagcaagtgtcccagagggagcgag
gtcaccatgctggtgcagagaggagtggtgcctgccaagaggagccccaagctggtgcag
cagctggagaggaaggacagtcagagcagctcccagcacagtgtgtgcagccatcgcagc
acccacacagactcccccagccaccccccctccaacatgcccagtgaggccatggccccc
cctccggccgcacccactcagccgctgcctggcttgcctccgttgcccacccaggaccct
ggagatggcaccataaccctccagaagaagccagaccccttcaagatctgggcccagtcc
aggagcatgtatgagagcagacagacagattgccaggagcaggagattttcctgtggcgg
aaggatacaggatttgggttccgcatccttggaggaaatgagcccggggagccgatctac
attgggcacatagtgaagtacggtgcagcagatgaggacggacgcctgcgttcgggggac
gagctcatctgtgtggacggcacggcggtggtggggaagtctcaccagctggtggtgcag
ctgatgcagcaggccgccaagcagggccacgtcaacctcaccgtccgacgcaagagctct
ggatacggagtttcgaaaggggagggtgacgtgcccccgtcccctgcctcgtcccaccac
agcagcacccaggccccctccctgacggagggcaagcggaccccccagggcagccagaac
tccctcaacacggtcagctccggcagtggctccaccagtggcatcggcagtgggggagga
ggtggctctggcagtgctgtggtcactgcagccctgcagccctatgacgtggagatccaa
cgtggagagaatgagggcttcggattcgtcattgtgtcatctgtctctaggcctgatgct
ggaactacgttcgctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatc
gaggggagccctgcggaccgctgtgggaagctgaaggtgggtgatcgcatcttgtccgtc
aacggctgctccattaccaacaagtcccactcggacatcgtcaacctgatcaaggaggcc
gggaacacagtctctctgaggatcattcctggtgatgagtcctccaacgcatctctgttg
accaacgctgagaagattgccaccatcaccaccacgcacacaccccaaactgccatggag
ccccggaacaactcaaagtcgaaacaggctcctcctccacctcctccgacaaaagctcag
acctcacaggacgccgagttctactctgtggatctggagcgggacagtaaaggctttggg
ttcagcctgagaggaggacgggagtacaacatggacctatatgtgttgaggctggctgag
gatggggcggctgtcaggaacggcaagatgggggtgggagatgagatcctggagatcaac
ggcgagagcacaaagaacatgaagcacgcacgggccatcgagctgatcaagaatggtggc
cggagggcacacctgctcctcaagaggggcgatggatctgtgcctgaatatgactccagc
catgacgggcactctcccacacccagggcacaaaactctccggaagtgagaaccctgcca
ccaaacagccgatatcacccctcatcggagtcaagttatccaccagaccttcacaaacca
tcacgccacaaggatgctgcgcagggccgagacagggacagggtggagcaccagggccgg
cactttaacccccaccaccatcacacctggaacaacaaccacagccataccacccccagc
caacactaccctgaaaacagcggcggcaacaataagaagagccggggccgcaaagtcaac
aagtcagagtcagagagcggcatctcaaaactcttaaagactctgcgtaaggacagctct
gggaagaaggctgcagcggcggcggcagctacagaacgagagcgggagctctccgctagt
agcagtactctagacccgaggtacagtcgaccacgccgcggctccctcgaccgttcgccc
acccgtaaacataacgcctcccctgaccgacggcgggccaagtccatggaccgcagggca
gagcgagcacaccgagaccgcacacccgagaaggagaacgaggacggaggtttcctcagt
catgcggctactcctgaacaaccactctacgaccgcaggcttgtgagcgagccacagacc
ccgggccgggcctacttagaggccaccaccccagagcgcctgaacaaaagggcttcctcc
ctgtctctttccagggggtggactcctgaaagaggcagcctgaagaacggcaaccttcgg
agggactcgccggttgagacgagggaggagaggtatgggatgaacggaacgccagagaga
cggtacaggtcagagagagattcgtctccagacagcagctacagcagggaggagcggaac
tactacagtacactgaagaacaatgcctccactcacaaccacgcaggctacaacaatgca
ggacactgcaacaacgcagcaggacacaacagcgcagcaggacacaacaacgcagcagga
cacaacaacgcagtaggtcgcgcccagaaccagttccccgagcctatgagaaggctttac
aaagagagccccaaggacctcagcatctga
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integrated database retrieval system
