Salvelinus sp. IW2-2015 (Arctic char): 111966182
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Entry
111966182 CDS
T05762
Name
(RefSeq) poly(rC)-binding protein 4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111966182
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111966182
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
111966182
NCBI-ProteinID:
XP_023846389
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Position
LG7:1772261..1815767
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AA seq
468 aa
AA seq
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MRLPVCNSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDCVFRAFTMITCKLEEDLTTLVANGTISNKPPVTLRLVIPAS
QCGSLIGKGGAKIKEIRESTRAQIQVAGDLLPNSTERGVTILGSQDSVIQCVKLICTVIL
ESPPKGATIPYRPSPSPGALLISGNQVFEASDFSPHPLYSLSQGGLDLHQSDLFQAYTVQ
NQXGIPHTELAKLHQLSMQQNMQQSPMCQQTTTVLPGMDSNSQTSQELLIQNDLIGSIIG
RQGTKINEIRQVSGAQIKIGSQLDGTNDRHVTITGTPVSINLAQYLITSCLETAKSTAQA
ASMATHNMSDLNMVFTHPASPASSPHTASTLAAMGTLSPAPVMGHPYGALPFSSLLGVKS
VPFLTLSSPAPQVAVTAAPSHTSLAAYTTKISSANCIKKPDRQKFAPY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgtgtgcaactcccacatcactatgaactgtgagcaggactttggagac
gggggcctgggtgtgaccctcacactccgactgctcatgcacggcaaggaggttggcagt
atcataggcaagaaaggtgagacggtgaaaagaatacgggaggagagcagtgcacgagtc
aacatttcagagggatcatgtccagagaggatcatcaccatcaccggctctacagactgt
gtcttcagggcattcaccatgatcacatgcaaactggaagaggacctcaccacactggtg
gccaacggcaccatcagcaacaagcccccagtgaccctacgactggtcattccagccagc
cagtgtggctccctcatcggcaagggaggggcaaagatcaaggagatcagagagagcacg
cgagcacagatacaagtggcaggagatttgctgcccaactctactgagcgaggggtgacg
atattggggagtcaagactcggtaatccagtgtgtcaagctgatctgcacagtaatcctg
gagtctcccccgaagggtgctaccattccctaccggcccagcccctccccaggagccctc
ctcatctctggcaaccaagtgtttgaggcgtcagacttttccccccaccctctgtactct
ctctcccagggcggtcttgacctgcatcagagtgatctcttccaggcctacactgtacaa
aaccaayatggcattccacatacagagttggccaagctacatcagctatccatgcagcag
aacatgcagcagagtcccatgtgccagcagactacaaccgttcttcctggaatggactca
aactcccagacatcgcaggagctccttattcaaaacgacctgataggctcgatcatcggc
cggcagggcactaagatcaatgagatcaggcaggtgtcgggggctcagataaagatcggc
agccagctggacggaaccaatgaccgacacgtcaccatcactggcacaccagtcagcatc
aacctggcccagtacctcatcacctcctgtttagagacagctaaatccacggcccaggca
gcctccatggccacccacaacatgtctgacctcaatatggtcttcacacatcccgcttcc
ccggcctcctccccccacaccgcctccaccctggcagccatgggtaccctctcccccgcc
cccgtcatgggccacccctacggcgccctgcccttctccagtctgttaggggtcaagtct
gtccccttcctgactctctccagccccgccccccaggtcgctgtcaccgcagccccttcc
cacacctccctggcagcctacactaccaaaatctcctctgccaactgcatcaagaaaccc
gacaggcagaagtttgcaccctactga
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