Salvelinus sp. IW2-2015 (Arctic char): 111966209
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Entry
111966209 CDS
T05762
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111966209
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111966209
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Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
DUF5365
ApbA
Motif
Other DBs
NCBI-GeneID:
111966209
NCBI-ProteinID:
XP_023846444
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Position
LG1:34153939..34157413
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AA seq
425 aa
AA seq
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MEMERIPSAQPTPKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQEGHGDLTPSHMVNHLHKVAAEVLQG
PPRSPCKPRPEETTSHYQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHAGGEQSGS
DTDTDSGYGGEQVEHLASHAGYYGQERQLKRALGEKRASFCIKQEDEACHKRSRVESSED
ESLSGGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagctg
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcaccgactaatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgcttaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcttctcccagccaggagaacagtgaggagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcagtacctggtcaaccaggagggtcacggtgac
cttacaccctcccacatggtcaaccacctgcacaaggtggccgctgaggtcctccagggt
cctccccgtagcccctgcaaaccccggcctgaagagaccaccagccactaccaacatcat
caggcccacagggagaagcctgcaggtcagccccccaagcccagtgaagggcatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgcgggcggcgagcagagcggcagc
gatacagacacagacagcggctacggtggcgagcaggttgagcatctggcgtcgcatgca
gggtactacggccaggagagacagctgaagagggcgctgggcgaaaagagggcatcattt
tgcattaagcaggaagatgaggcgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcaggcggagagtcgtcctcatcctcctccagcggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctctgcatgcccttctacctcatc
cccccctctgccgctgcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctggggggctctgcgcagggcatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccccaccgtagcc
caaagccccatggactccccagccttcctccaagtgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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