Salvelinus sp. IW2-2015 (Arctic char): 111966219
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Entry
111966219 CDS
T05762
Name
(RefSeq) cadherin-13-like isoform X1
KO
K22658
cadherin 26
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111966219
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Major cadherins
111966219
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
111966219
NCBI-ProteinID:
XP_023846451
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Position
LG7:3697565..3719115
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AA seq
845 aa
AA seq
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MGTRSTCLLMTLCLGIVSVSSEELLHRQKRTWIVDSFKIEEARPGPYPYALGKIQVEKAF
RVGFHLQGQGVDLDPKGKLSINTDTGDILVHGELDYELYQKLKLTFEARDTSNNALDTRL
GVEVEILDINDNPPVFQRNTYTVNLKESTSQGDFVTAVVATDKDHSRTNNGTFDLKMVSI
TPTPPDTLEFFLEQSGSTGIIKFKGCLEHEKSEKYTILVEAKDRGEVVQLSSTCTNIINI
EDGNNHLPVFTGQTGAGSIKERDSGDVPILRLQVSDQDTKGTEAWKAKYTIHGDKDQNFR
ITTDPDTNEGVLFVEKPLDYEDGSQRNLSVSVENEAPYFSCKVKGRPATDLWDVVTTGGA
SLTGLKPPLLPTRQVTVTVEDVNDPPIFPYAIKNVTVEENVEVGWYLETFTAIDLDRSHA
NTFKYVKGKDPCDCVAVDAMTGKITTTKILDRESPYVKDNVYQVTVFAIDDGQPPMTGTG
TLNIHLKDQNDNLPELEMATMDMCLSDEHSEVNITAYDLDGEPYSGPFYFQLQGDDVKGK
WRIDPDSGYTVKLVKENTVYAGHHELLLKVFDLQGQGALHNLSVTVCDCSRVASCRMRRV
TGSKIGESAVGIVLAAMLLLLGVLLLALLMTCKRDLKLIPVDEISGEHLLKSNIEIPGTD
CKVPTAPILQVDSQVETKAAFQPIKRMSVVQKSASMRASVRSGYSKYSSYYQEQQEGQFQ
RGTSLRKSAPTKLRSNGYYEQGSMVSRSMKTRTRYSSWEEDNYLNKSGNLMTLLNQRMYT
LQVKGEELGDYAPHPYAEEGDLETDLQLDAISIPETLFDQDTLLYLGPRFNTLASFCNTP
DPSAS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggggactagaagtacctgtctgctcatgacactgtgtctggggattgtcagtgtgtcc
tctgaagagttactgcatcggcagaagagaacctggattgtagactcttttaagatagaa
gaggcgagacccggaccttatccttatgcactggggaaaattcaggttgagaaggcgttc
cgtgtgggtttccatctacaaggtcaaggggttgatctggaccccaaaggaaaactgtct
atcaatacagacactggagatatcctagttcatggagaactagactacgagctttaccag
aagcttaagctgacatttgaggccagagatacatccaataatgcattggacacccgactg
ggagtggaggtggagattctagacatcaatgacaacccaccggttttccagaggaacact
tacaccgtcaacctgaaagagtctacttcacaaggagatttcgtgacagctgtagtggca
acagataaagatcacagcaggacaaacaacggcacatttgacctgaagatggtctccatc
acccctacacccccagacaccctggagttcttccttgagcaaagtggttcgactggaatc
atcaaattcaaagggtgtctggagcacgagaaatcagagaaatacaccatcctggtggag
gctaaagatcgtggagaggtggttcagctctccagcacctgtacaaacatcatcaatata
gaggacggaaacaaccatttgcctgtcttcactgggcaaacgggtgcaggaagcatcaag
gagagagacagcggtgatgtgccaattcttcggctccaggtttcagaccaagataccaaa
ggtactgaagcctggaaggccaaatacactatccacggagacaaggaccagaacttcaga
atcaccactgatccagacacaaatgaaggagtcttgtttgttgaaaagcctctggactac
gaggatggctctcagaggaacctgtcagtcagtgtagagaacgaggcgccctacttctct
tgtaaggtcaaaggtcgtcctgccacggacctgtgggatgtggtcaccacaggtggggca
tctttgacgggcctcaaaccgcccctgctgcccacccgccaggtgacggtcacggtggag
gacgtcaacgacccgcccatcttcccctacgccatcaaaaacgtgacggtggaggagaat
gtggaggtgggctggtacctggagacgttcactgccatcgatctggacaggagccatgcc
aacaccttcaagtacgtgaaaggaaaggacccttgtgactgtgtggcagtagacgcaatg
actggcaaaataaccacaactaagatcttagaccgagagtcaccttatgtgaaggacaat
gtctatcaagtgacagtgtttgctattgatgatggccagcctcccatgaccggaactgga
acgctcaacatccacctaaaggaccagaatgacaaccttccggagcttgagatggccacc
atggacatgtgtctttcagatgagcacagcgaggtcaacatcacagcctacgacctggat
ggagaaccctacagcggaccattctacttccaactccaaggggacgatgtcaagggcaag
tggaggattgaccccgacagcggctacacagtgaaactggtgaaggagaacacagtgtac
gcaggtcaccacgagctgctgctgaaggtgtttgacttgcagggtcagggtgccctccac
aacctgtccgtcaccgtgtgtgactgctccagggtggccagctgccgcatgcgcagggtc
actggatccaagattggagagagtgctgtagggattgtcctcgctgccatgttgctacta
ctaggtgttctactgttggccctcctgatgacctgtaagagagatctgaagctgatccct
gtagatgaaatctctggagaacatctgctcaaatctaacattgagatcccaggaactgat
tgcaaggtgcctacggctcccatactccaagtggacagccaggtggagacaaaagctgct
tttcaaccaatcaagaggatgtcggttgtacagaagtcagccagtatgcgagcatcggta
cgttcaggatattccaagtattcctcctactaccaagagcaacaagagggacagtttcaa
cgaggaacctccctgcgcaagagtgcgcccacaaaattacgctccaatggttattatgaa
caggggtcaatggtgagcagatcaatgaagacaagaacaagatactcctcatgggaagaa
gataattatctcaacaaatccgggaacttgatgaccctactgaatcagaggatgtacacc
ctgcaagttaaaggagaggagctgggggactatgccccgcacccctacgctgaagagggg
gacctagagacagacctccagctggatgctatctccatccctgagaccctcttcgaccag
gacacgctcctctacctgggccccaggttcaacaccctggcctccttctgcaacacccca
gaccccagcgcatcctaa
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