Salvelinus sp. IW2-2015 (Arctic char): 111966408
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Entry
111966408 CDS
T05762
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111966408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111966408
03036 Chromosome and associated proteins [BR:
salp03036
]
111966408
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
111966408
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111966408
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111966408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
111966408
NCBI-ProteinID:
XP_023846779
LinkDB
All DBs
Position
LG7:complement(12398151..12419129)
Genome browser
AA seq
1502 aa
AA seq
DB search
MEDSHTLYISELGDDDNLEEEDKELEETHCSLYLMSMETDELADSNTSCQKPEAKGCDLK
QDLGSVSHSTTPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHHTH
IFKCKYCSKSFGSKIGRRRHERRHENAKTRPGSLIKPVEPLSSALQHNGPECASSPSSSG
ASVLADREQVSTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEATLL
QEAKHPKLPPIKSQQNTNNTSPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVSTS
TVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGITGQPLTKRRTATPP
LLPQIKTELESEVVVSSSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMLNVESTTDVGVS
IAVNAPTSESQCSSPACSLSSNDESEISNSPPVNDAMTTRLLPEGWSPMSGGSSCNQQPL
DLSNAVKKSEDEALREAVLDLSVHRKSADDSEAKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEHELSILENHDAPLGTDFAIVTASDMSPATEGEVFGLTLPSSALSPSPSSLA
SVTRQSISPCTIALASPSPHPVLPTAPSLITVLAPPTSSSSNFTNQPILQVLAPKISPKP
LIICTENSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTINQIAL
NTTTVDSNIGFEVPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENLVPTTIAFQE
NNFESTAPAQIVINQQQLLSLPHETVDPTILVSSLEQSVTISTLSAVISECQESISSPVP
SIIKKESNQKVVSEDISICPSKTAPPSEGTSQVEESSNETLSKLQETFTKEFICNVCDKL
FHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKEFAY
LCNLKHHQKELHPGQECKYTEEENGKLRPQNYNNSTKVITEALSYCAMAESNKPVIKDEG
ELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVASATN
FTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHFAKA
QNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKHLVQRAISQRSKST
SLTKKTSSLVNEEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSISYTK
ENNGHLRGEVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASVQTP
QEAPKLTALSLVRPFNSPQRQGNRMQHGVKEIRSNVTMVKSHQQQPQVDEHPCSQSGRVR
GPVTRSLQQIVVTASAKEEQLTSQEPPRDLQFCSKRAVRKQLITLRESLAVTGKYRHGLR
IL
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagatgatgacaatttagaggag
gaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaaacggat
gagctggcagattcaaacacaagttgccaaaaacctgaggccaaaggctgtgacctgaag
caggatttaggatcggtctcccattcaacaacccctgagctcccagaggatcctgaccat
gaccctgatgtagagctccaggactcctttccctgccaattctgtgaaagaaattttacc
agcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccaccacacacac
atatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccggcgacggcat
gagaggagacatgaaaatgcaaagacaaggcctggatctttaataaagcctgtggagcct
ctaagttctgccctacagcacaacggtccagaatgtgcttcttctcccagtagctccggt
gcctctgttttggcagacagagaacaggtgtctacgtcagatgaacatggagaattacag
ggtggtcacacttgcaagtattgcaaaaaggtttttagcacacatacaaacatgcgacga
catcagcgcaggatccacgagcgccatctccggctcaaaggtaaggaagccacactgttg
caggaagcaaaacatccaaagctaccccctattaaatctcaacagaataccaacaacaca
agcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctggatatc
tctggtaacatctctgagaacctcagcttttatatagatgggaagattgtatcaacaagc
actgtcagcggctgtgaggtagttgaagtgaactctggatctgctactttagttggacta
aatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagactgctact
cacacaggaaaagggataactggtcaacccttgacaaaaagaagaactgccacaccacct
cttctaccccaaatcaaaactgaactagaatcggaagttgttgtgtcctcctcttcttca
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggacagggtctccccca
aactcaccacaacaaagccctatgttgaatgttgaaagcacaacagatgtgggtgtttct
attgctgtcaatgccccaacttcagagagccaatgcagttcacccgcatgcagtttatcc
agtaatgatgagagtgagatctccaacagtccaccagtaaacgatgcaatgacaactcgt
ctcttgccagagggatggtccccaatgagtgggggtagttcctgcaaccagcaacctttg
gacctctcaaacgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttggac
ttgagtgtgcacagaaagagtgcagatgattcagaagcaaagagaattttagttccacaa
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tacgcaaacttagaggttgctgcagagcacgaattaagtatattagaaaatcatgatgca
ccattaggtacagactttgccatagttactgcttcagatatgtcacctgctactgaaggc
gaggtgttcggattaactttgccctcttcagcacttagtccatccccttcctctctagct
tcagtcaccaggcaatcgatctcaccatgcaccatagcacttgcttccccatctccacat
ccagtcttacccactgctccgtcgctaattactgttttagcaccaccaacatcttcctct
agcaatttcacaaatcaacctatccttcaagtattggcccctaagatatctcctaaacct
ttaataatctgcactgaaaattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactataaatcaaatagctctg
aacactaccacagttgattccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccttgtccctaccacaattgctttccaagaa
aataattttgaatccacagcacctgcgcaaattgtcataaatcagcagcagcttctgtcc
ttgcctcatgaaaccgttgaccctactattttagtatcttctttagagcaatcggttacg
atttcaacgctgtctgcagtcatatctgaatgtcaagaatccatttcctcccctgttcct
tccattattaaaaaggaatctaaccaaaaggtagtatcagaggacatatctatctgcccc
tctaaaacagcacctccctctgagggcacaagtcaagtggaagaatcatcaaatgagacc
ctctccaagctacaagagactttcactaaggaattcatatgcaatgtatgtgataagctt
tttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaatggccatac
aaatgtgagttctgtgtgctgctctttgggaagcccacggcattgcttgatcacaggtca
accctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaatttgcttat
ctttgcaacctgaaacatcatcaaaaggagttgcaccctggccaggaatgcaaatacaca
gaggaagaaaatggcaagctacgaccccagaactacaacaattcaacaaaagttatcaca
gaggctttgtcctactgtgccatggcggagtccaataaacctgtcataaaagatgaggga
gaattagatgacgctactgaggaactctttaccacaataaagataatggcttctgaggga
ggaaaacccaaaggcctggatgtttgtcttggcatcaaccaacactatcccagttttaag
ccgcctccgtttccctatcacaaccggacacctgttggctctgtagcctcagctaccaac
ttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcactaaatgtggc
aatagctttgataacatgccagagctgcacaaacacattcttgcctgtgcaaatgccagt
gacaaaagacgctacacacccaataagaaccccattcctcttcgtcactttgcaaaagcc
caaaatggagtactgtcctctactaattccacaaatggccaaaatgctctacacacggca
agtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaagcttaatgca
ctcaacaaaaggaaaaaacatctggtacagagggccatttcacagaggagtaagtctacc
tctttgacaaagaaaacctcttctctagtgaatgaggagcaagagatctatgtctgtcca
cattgcattagagaattcacataccgccgcagccgaaccaagcacatggccgtctgcccc
aggaaacctgctgccaaagaggccaagaaaagaaaagatggcagtatctcttacactaag
gaaaataacggccaccttcgcggagaagtccttcatttggaagagaaatctgaccatgaa
cagaaaagcagagcccatagttctagtccaacaaagaggacagccatattaccagctcat
aaagtcctgtcaaacaaaaaaagtaaagccatcattgcaatggcaagtgtccaaacaccg
caggaggcacccaaactgactgcactgtctcttgttcgccctttcaactccccacaacgt
caaggcaataggatgcagcatggtgtaaaggaaattcgttctaacgttacaatggtgaaa
tcccaccaacaacaaccacaggtggatgagcacccctgcagtcagagtggaagggtgagg
ggaccagtgacccgcagtctacagcagattgtcgtcacagcttcagcaaaggaagaacag
ctgaccagtcaggagccaccaagggatctgcagttttgttcaaaaagagccgttcgcaaa
caactcatcacactgagagagtccttagcggtcactggcaagtatcgacatggccttcga
atcctatga
DBGET
integrated database retrieval system
