Salvelinus sp. IW2-2015 (Arctic char): 111966415
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Entry
111966415 CDS
T05762
Name
(RefSeq) transcription factor HES-4-B isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111966415
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111966415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111966415
03400 DNA repair and recombination proteins [BR:
salp03400
]
111966415
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111966415
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
111966415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Caulimovir_coat_dom
Motif
Other DBs
NCBI-GeneID:
111966415
NCBI-ProteinID:
XP_023846792
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Position
LG7:complement(12952052..12953840)
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AA seq
290 aa
AA seq
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MPADTMEKQTASPIAGAPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADTTVLSKYRAGFNECMNE
VTRFLSTSEGVNTEVKSRLLNHLSGSLGQMIAMNYPQPTPTQQAHIGQPLHVQLPSTVPN
SVSMGSKLSTVEALSPQVFGGFQLVPATDGQFAFLIPNPAFASASTPVIPLYANAGVPMT
VNASPVHCSSAPTASSPVHGMTSFVGVSQAVSPVGVSTGSESTEAVWRPW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgacaccatggagaaacaaacggcatcccctattgctggtgcacctgcaaat
ggttcccatactccagacaaacccaagaatgccagcgagcatagaaagtcctcaaaaccc
atcatggagaaacgtaggagagcgaggataaacgaaagccttggccaactcaagacactc
atcctcgatgcacttaaaaaagatagttccagacattctaaattggaaaaagccgatatt
ctggaaatgacagtgaagcacttacggaatttacagcgtgtgcagatgactgcagcgttg
tcagcagacactactgtcctcagtaaataccgagcgggattcaacgaatgcatgaacgag
gtcactcgcttcttgtccaccagcgagggggtgaacacggaggtaaagtcgcggcttctc
aaccacctgtcgggttccctaggccagatgatcgccatgaactacccccagccaactcca
actcaacaggctcacattgggcagcctcttcacgtgcagctaccttctaccgtgcccaac
agtgtctctatgggttccaaactcagcaccgtggaagccttgtctcctcaagttttcggg
gggttccagcttgtgcctgccaccgatggacagtttgcttttcttattcccaaccctgca
ttcgcctcagcatcaaccccagtcatccctctgtacgctaacgcaggtgtacctatgaca
gtcaacgccagtcctgtccactgcagctctgcgccaacagcatcatccccagtccatggg
atgacatcattcgtcggtgtttctcaggccgtcagccctgtcggtgtcagcactggttcg
gagagcactgaggctgtttggcgaccctggtag
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