Salvelinus sp. IW2-2015 (Arctic char): 111966437
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Entry
111966437 CDS
T05762
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111966437 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111966437 (lamb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
EzrA
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
111966437
NCBI-ProteinID:
XP_023846830
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All DBs
Position
LG7:13747275..13807943
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AA seq
1785 aa
AA seq
DB search
MHASLVMFICALAYATAREPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCDSVFPGVSKGPLRK
VDNVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNAGGGVCDHC
LHNTMGRNCEMCKPFYYKDLSRDIRDPGVCTACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAANLRGCQLCQCDPRGTVSESPKCDPVSGDCFCKRLV
TGRSCDQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPPPVCMERGVSYTLRFEFSRYLDGNSILILGTTAANILVDSISLIPRYSSLEMFIGGDP
ASIARKQSYERYRCHEGAKSVTRPQISNVCAKLITSMSAIINHGALPCQCDPQGSVSSVC
DTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVTRSCDQLTGQCPCRPG
AFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCANGYYGN
PELGTGMGNQCRPCPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGSRCEECAPGYY
GNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECEKCLYNTEGPDCGVCKSGYYGDASRR
NCRKCTCSFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKPNYWNLASGRGCE
ACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRIQCRVCDCDPRGIETS
QCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVVQDLAVRTKTLSE
RAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNTRNTTAEAVSSLMELIEDLRSQIGETT
DTLNHLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQLDILKNSNFLGAYDSI
RSSYNKSRDAERRANQSTITTPSTVSQSADTRRKTERLISAKKDDFNRKNAANKRTLGDL
NAKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCGGLNCNGAVAMADNAL
ERSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKATNTKNKVERSNNDLR
DLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKDRVRSLSNVDAIL
QQTQDDVRKAEQLLREAKKARNRAEGVKSTAETVKQALEDAKKAQAAAEKAIQRARADIG
ETEARLAQIESETSSSEHDLNDAMDRMGNLGREINALKLKRAHNSVAAARAEETATMARD
KANEAKQILDGELMDKYHTVQELVDTKAKTVQEAKKKAERLRDEAKELLKDAQNKLQRLA
ELEKDYEENQKTLEGKAQQLDGLEDKMKAILNNINKQIQIYNTCQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatatgtgccctggcatatgccaccgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaaggcatcatctacatgcggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaagtgtttccagtgtgactctcgccgccca
tatgatcctgtctacaacaccatcagtcaccgcattgagaacgtcatcaccacattcaaa
ccacaccgcaagaagtcatggtggcagtcagagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacatttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgt
tactttgcctacgactgtgattcggtcttccccggggtatccaagggacccctacgcaaa
gtagacaacgtcatctgtgagtcgcgctactctgacatcgagccgtccacagagggagag
gcgatctacagggttctggaccctgccatccacattgaggacccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacactctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactatgccatgtacgag
ctggtcgtccgcggaaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctgaactgtgagctgtgtgatgacttccatagtgacatgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgtaactgtaatggccactccaaccagtgtcac
tttgacatggcggtgtacctggccacgggcaatgccggcggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattttactacaaggatctc
agtagggacatcagagaccccggggtctgtactgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgacgagccgtccctgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaagggcatcgctgtgacaaatgcaagtctggcttcttt
ggcctgagtgcagcaaacctccgcggctgccaactctgccagtgtgaccccaggggtact
gtgtcagagagcccaaaatgtgaccctgtgagcggggactgcttctgcaagcgactggtc
accggacgcagctgtgaccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctctatggag
aatgggcagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtggtacttcatggctctggaccactatacctatgaggctgagctggccatattggga
cagggctgcagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaatatcccc
tactccatggagtacgacctcctcatccgctatgagccacagatgccacgggactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtgtccctgcctgcaggatccaggtttgtcgtg
ctgcctccacctgtatgcatggagagaggagtgagctacactcttcgctttgagttcagt
cgctatctggatgggaacagtattctcattcttggtacaaccgctgccaacattcttgtg
gactctatctccctgatccctcgttactcctccctggagatgttcattggcggtgaccct
gcctccatcgctaggaagcagagctacgaacgctaccgctgccacgagggggccaagagc
gtgacacgcccccagatcagcaacgtctgtgccaagctcatcaccagcatgtcagccatc
attaaccatggagccctgccttgccagtgtgacccccagggctcagtcagctcagtgtgt
gacacgcacggaggtcagtgtcgctgtaggccaaacgtgattggacttcgctgtgaccag
tgtgctcctgggacgtacggctttggacctgcaggatgtaaagcatgtgagtgcaatctg
gaaggtgcggtcactcggtcctgtgaccagttgactgggcagtgcccgtgccgcccgggt
gcgtttggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cgatgcctgtgtaatggtcatgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggacaacactggaggggacaaatgtgacaggtgtgccaacggttactacggcaac
ccagagttgggcacaggtatgggtaaccaatgtcggccctgcccttgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggttcccggtgtgaggagtgcgcccctggttactac
ggtaacccctcccagccaggtgggcggtgccagccctgcaggtgcagtaataacattgac
atgtcagatctggatgcgtgtgaccggcggacaggagagtgtgagaagtgtctctacaac
acagagggaccggactgtggtgtgtgcaagagcggttactatggagacgcctcgcgacgc
aactgcagaaagtgcacctgtagcttcctgggcacagagcatactcagtgtacagcgcgg
gatgagtgtgtctgccagcgtgccacggggcagtgccagtgtttacccaacaccatcggc
ctgacatgtgaccactgtaagcccaactactggaacctggctagtgggcggggctgtgag
gcctgcggctgtgaccccaacaacgctgtcaactcggcctgcaacgagttcactggaaag
tgtcagtgtcgtgatggattcggtggaaagacctgcacagactgccaagagaactactgg
ggagaccccaggatccagtgcagagtctgtgactgtgacccccggggcatagagacatcc
cagtgtgaccagaagtcaggccactgtgtgtgtcagcagggggtgtcgggcgtgcgttgt
gaccagtgtgcccggggcttctcaggccagttccctaactgccagccctgccatcagtgc
tttggggactgggaccgggtggtgcaggacctggctgtccgaaccaagaccctgtcggag
cgggctcaagagatccagaccacgggcctgactggagcctatgagaaggccttcagagac
ctggagaagaagctggcacaggcccagggcatcgtcaacacccgcaacaccaccgcagag
gcagtcagcagcctgatggagctcattgaagacctcaggtctcagataggtgagacaaca
gacacactgaatcatctggagggagacctgaccagtgtgcagaacagcaacgttgaggcc
agtaatgagctcagtgctctggagagagaggccaaacagctaaacctgacctcagatcag
ctccaccgtcaactagacatcctcaagaactccaacttcctgggtgcatatgacagcatc
cgcagctcctataacaagtcccgtgatgcagagcggcgagccaaccagtcaaccatcacc
acgcccagcactgttagccaatcagcagacacacgccgcaagacagaacgcctcatctct
gccaagaaagatgacttcaaccgtaagaatgctgccaacaagcgaaccctgggggacctc
aatgccaaggctcagaccctggacatgaagaagatcaatgagaaggtctgtgggacccct
ggcgatgccccctgtgcagagagcctttgcggaggagcaggttgccgtgacgatgagggg
aacaggcactgcggaggcctgaactgcaacggtgccgtagcgatggcagataacgccctg
gagaggtccaagcacgcagagaaggagctgaacaaagccatgggggaggtagaggagctc
ttccacaaggttgcagatgccaagaccaaggcggaggaggcgaagagtaaagcccaggca
gctctggacaaggccaccaacaccaagaacaaggtggagcgctccaacaatgacctgcga
gacctcatcaagcagatccgggacttcctcatgcaggagggtgctgatccagacagcatt
gagacggttgccaaccgtgtcctggagctgtccatcccagcctcaccacagcagatcaga
cacctggcagaggagatcaaggaccgggtccgaagcctctccaacgtagacgccattctg
caacagacacaggacgatgtgcgcaaagcagagcagctgctgcgggaggccaagaaggcc
aggaatcgggcagagggggtgaaatccacagcagagacggtaaaacaggcacttgaggat
gctaagaaggcccaggccgcagcagagaaggccatacagcgggctcgggctgacattggt
gaaacggaggctcgactagcacagattgagtctgagacctccagcagtgaacatgacctg
aatgatgccatggaccgcatgggcaacctaggtcgggagattaatgctctgaagctcaaa
cgtgcccacaacagcgtggcagcagctcgagctgaggagacagccactatggcacgggac
aaagccaatgaggccaagcagattttagatggggagctgatggataagtatcacacagtg
caggagttggtggacacgaaagccaagaccgtccaggaggcgaagaagaaagcagagcgc
ctaagagatgaggccaaagagctactgaaggacgcccagaacaagctccagagactagca
gagctagagaaagactatgaagagaaccagaaaacgttggagggcaaagcccagcagttg
gacggcctagaagacaagatgaaggctatcctcaacaacatcaacaaacagatccagatc
tacaacacctgtcagtaa
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integrated database retrieval system