Salvelinus sp. IW2-2015 (Arctic char): 111966477
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Entry
111966477 CDS
T05762
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111966477
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111966477
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Contactins
111966477
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Others
111966477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Pur_ac_phosph_N
Ig_4
Interfer-bind
NDNF
Motif
Other DBs
NCBI-GeneID:
111966477
NCBI-ProteinID:
XP_023846907
LinkDB
All DBs
Position
LG7:15995749..16064228
Genome browser
AA seq
1025 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLAECLDSGSFHGPRWRMEPGDLFIPVDSMEEEATLTCDAKGIPP
PQYRWSLNGTLINLELDHRRRMSGGNLIIRSLDRYQDGGRYQCTAYNTIGAVLSRRASLQ
FAYLDHFKLHTRSAVSVREGQGVVLLCGTPTSSGDLSYSWVFNEYPYFVQQDNRRFVSQE
TGNLYIAKVEPSDVGNYTCVVMNSITKGKVHSSPTSLVLRKDGVMGEYEPKIEVHFPDTV
PAAKGSVVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNIATGRLAFHAKPQWIQTMRDTALAIEERLHWECRANGKPKPSYNWLKNGQV
LITEERVYVDNGVLLISSLNLSDAGMYQCVAENKYGVIYFSTELMVLASSPDFTGNLLRA
LLKAKAGTIVTLECKPQAYPTASILWKKGNQPIHTNDRITLSADGTLRITNMTKYDAGSY
TCFARNRFGTSSTTGRLLITDPTRITQGPVDMEIIVGESIVLPCQIACDPVLDVFFSWAF
NGQLITKTDRHFELVGGRTAGDLMIRNIQLNHAGKYICVVDTDVESLSAVAILIVKGPPG
PPDTVAVEEVTDSTAQLSWSRGRDNGSPITSYLIQTRTPFTVGWQRVDTVPEVIDGNTLT
ATVVDLNAWVEYEFRVVAKNSVGVGEPSPTSLQTRTEDAVPDAAPTDVGGGGGSRSELVV
TWEPVPEELQNGESFGYIIAFRGLGEMTWTHVATSAPGASRYVYRNDSIAPFSPFHVKVG
AYNSKGQGPFSPVVTIYSAEEEPSGMPGGVWARSVSASEIEVNWQALSFTPERVLGYEVV
YWEDDTKPETMGKVRVPGSQTSVTVSGLERNTQYFLTVSAFNTAGTGPFLPAINATTKKS
PPGQPPLNVEWTLIGSQITIYWEPVVAMETESEVTGYQLSYRSLKHKEENMLLTNNSTAE
LTLVDNEDYVIHIRSLSEGGLGPATDPIRIHKLSMSARGSKAWSLNTSPVSLLLSIAFST
FRSTS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaccatggaaacagcttcttctgctatcaatcatcgactgtctcgcagaatgt
ttggacagtggatcattccatggtccaagatggaggatggaacccggtgacttgtttatc
cctgttgattctatggaagaggaggccactcttacttgtgacgctaaaggaatcccccct
cctcaatacagatggtcactgaatggaactctcataaatctggagttggaccaccggcgt
cggatgtctgggggcaacctcatcataagaagtctggaccgctaccaggatgggggaagg
tatcagtgtacagcctataacacaataggagccgttctcagcagaagagcaagcctacag
tttgcctacttggatcattttaaactccacacaagaagtgcggtgtcagttcgagaagga
caaggagttgtgttactctgtggaacacccacctcctcaggagaccttagttattcatgg
gtcttcaatgaatacccatactttgtccagcaagacaaccggcgcttcgtatctcaggag
actggcaacctgtacatcgccaaagtggagccctcagatgtgggcaactatacctgtgtg
gttatgaacagcatcacaaagggcaaagttcacagctcacccacatctctggtcctgagg
aaagacggagtaatgggagaatatgagccgaaaatagaagttcattttcccgacaccgta
ccagcagcaaaaggatcagtggttacgctggagtgttttgctcttgggaaccctgtccct
gagattacgtggaagagggctaatggagtcccgttccccagcaaagtgaagatgaagtac
tccaatgccgtcttggagatccccagcttccaacaggacgacacgggtggctatgagtgt
gtggccgaaaacaagatggggaagaacatcgctacaggccgattggccttccatgccaaa
cctcagtggattcagaccatgagagacacagccctggccatagaggagaggcttcactgg
gagtgcagggccaacgggaagcccaaaccctcctacaactggctgaaaaatggccaagtg
ctgatcactgaggagagggtctacgttgacaatggggtcctgttgatctcgtctttgaac
ctgtctgatgccgggatgtaccagtgtgtggctgagaataaatatggtgtcatctatttc
agcactgagctcatggtcttagcatcttctccagacttcactggtaacctgctcagagcc
ctgcttaaagccaaggccggcaccatagtgactctagagtgtaagccccaagcctacccc
accgctagcatcctgtggaagaaaggcaaccaacccatccacaccaatgacagaatcact
ctctctgcagatggaactttgagaatcactaatatgaccaagtatgatgcaggcagctac
acctgctttgccagaaaccgatttgggacctccagcaccactggaagactcctcatcaca
gatccaacaagaattactcaggggccagtggacatggagatcatagtgggtgagagcatc
gtgctgccctgccagatcgcctgtgaccctgtccttgatgttttcttctcctgggctttc
aacggacagctcatcaccaagacagacaggcattttgagctagtgggagggagaacagct
ggggatctgatgatcagaaacatccagttgaatcatgccgggaagtacatctgcgtggtg
gacacagacgtggagagcctgtcagcagtggccatattgattgtaaaaggcccccctggc
cctccagacacagtggcagtggaggaggtaacggacagcacagcccagctctcatggagc
cgcggcagggataacggcagccccatcaccagctacctcatccagaccaggaccccsttc
actgtgggctggcagagggtggacacagttcctgaggtaattgatggcaacacactgaca
gccacagtggtggatctcaatgcctgggtggagtacgagtttcgagttgtggcaaagaac
agtgtgggagtgggcgagcccagtcccacctccctccagacacggacagaggatgcagtt
cctgatgctgcacccactgatgttggaggagggggcggcagcagatcagagttggttgtt
acatgggagcctgttcccgaggaactgcagaatggtgagagcttcggttacattatcgcg
ttccgtggcctcggtgagatgacctggacccacgtcgccacctctgctccaggggcatcc
cgctatgtgtaccggaacgacagcatcgctcccttctcacccttccacgtgaaggtggga
gcctataacagcaaagggcagggcccgttcagtcccgtggtcaccatctactctgcagag
gaagagccgagtggtatgccaggaggagtttgggccagaagtgtttccgcctcagaaatt
gaagtgaattggcaggctctatcctttactcctgaaagagttctcggctacgaggtggtg
tactgggaggatgacaccaagccagagacgatggggaaagtgagggtacccgggagtcaa
acctcagtcactgttagtggcttagagcgaaacactcagtattttctcacagtcagcgct
ttcaacacagctggtactggccctttcctccccgccatcaacgccaccaccaagaaatca
ccacccggacaacctcctctaaatgttgagtggaccttgattggctcccagatcactata
tactgggagccggtggtagccatggaaacagagtcagaggtcaccggttaccaactgtct
tacaggagtctgaaacataaggaagagaacatgctcttgacaaacaattccacagccgag
ctgaccctcgttgacaacgaagactatgtcatccacataaggtcgctgagcgagggaggg
cttggcccagccacagatcccatccgcatccacaaactaagtatgagtgcgcgaggctcg
aaggcctggagtctgaacacatcccctgtctctctgctcctcagcatcgcattttcaacg
ttcaggtctacatcgtga
DBGET
integrated database retrieval system