Salvelinus sp. IW2-2015 (Arctic char): 111966489
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Entry
111966489 CDS
T05762
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111966489 (ube4b)
04120 Ubiquitin mediated proteolysis
111966489 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111966489 (ube4b)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111966489 (ube4b)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
U-box type E3
111966489 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
111966489
NCBI-ProteinID:
XP_023846935
LinkDB
All DBs
Position
LG7:complement(16889041..16935869)
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AA seq
1372 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPWPLPGTSGATPQPLPPAA
SHSLGLNVQNVTPATSPIGASGVAYCSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRDLAEKESAENSDVSEEQALQLICKILRVS
WKEQDRDVIFLPLLAAEFHQSTLKEVFSDFKDLIGQILMEVLLMSTQLHVHNPFASLTAT
SEPIAAAKSLDHHLTLIQPSSQGSSPMAPCAGSFGASSLSSLYGCSPHSLALNAARMISP
PLTTPTSPSLHPMVXPSPPSMANPPRLSLNLPSAPLPISQRYRPYSVTSPLGISTPPSPR
LASLPGPITEGLPVPPIILAPAPPLPTSPQSVPLPSTSPHRPTSMPLPLVPPSPRSAARG
AALATRIPSSPLSLLFFALSDMSQDNSDEEPEDEQEEDFTQVQFGSSLGVSGGGMAWESC
GDRFTIEACKETEMLNYLIERFDSVGMEERKAPKICSHPSVSQLLSNIRSQCISHAVLVL
QGALTQPRNPLQQSLLVPYMLCRNLPYGFIQELARITYQEEEVFRQIFVPILQGLGLAVK
ECSFDSDNFKFPLMALAELCEIKFGKTHPMCNLMTSLPLWCPKSLSPGTGREVQRLSFLG
AFFSLSVFAEDDSKVGDKYFSGPAITTENTRVVSQSLQHYLESARGEMFKILHNILLNGE
TREVALNYMAALVNRNVKKAQMQTDDKXVSTDGFMINFLSVLQQLSMKIKLETVDPYYIF
HPHCRLHVSPEETRLKATMEELKTWLAEMYNDPSKFSEPKFPTECFFLTLHTHHLSILPG
CRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRSKACADA
GLLDENLLRRCLQFYSMVIQLILRMVDPAYPHMSLPLNPEIPKSFAALPEFYIEDVAEFL
LFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQLRTQRF
SEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNMGHHGT
FLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPREQQQSR
QSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPK
CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSQELFEEVISKMTK
AGIKSTIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNI
MDRAIILRHLLNSPTDPFNRQPLNESMLESLPELKERIQAWMREKQGQGRFL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgacgagatccgcagaaggagactggccagacttgcaggaggg
caaacatcccagcccagcacccccctcagcactcccctgacgtccccacagagagagacc
cccccctggccccttcctgggacctcaggggccacaccccagcccctaccaccagccgcc
tcacattcacttgggctcaatgtccagaatgtcacccccgccacktctcctattggcgca
tctggggtggcgtactgcagtcagagcagcgagggagtgagctccctctccagctctccc
tccaacagcctggagacccagtcccagagtctttcccgatcccagagcatggacattgac
acagcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagtgatcgcagggagaagagggacctggctgaaaaggaatccgctgaa
aactcagatgtctctgaagagcaggctctgcagctcatctgtaagatcctgcgcgtttcc
tggaaggaacaggacagagacgtcatctttctccccttgctcgccgccgagttccaccag
agcactctcaaagargtcttctctgacttcaaagacctgattggccagatcctgatggag
gtgctcctgatgtccacccagttgcacgtccacaacccctttgccagcctgactgccacg
tccgagccaattgctgctgccaaatctcttgaccaccacctgacgctgatccagccctcc
agccagggcagcagtcccatggccccctgtgcaggctcgtttggggccagctcgttgtcc
agcctgtacgggtgtagtccgcactcgctggctttgaatgcagccaggatgatctcccca
cctctcaccacccccaccagcccatccctgcatccaatggtamccccaagtcccccttcc
atggccaacccccctaggctctctctcaacctcccttccgcccctctgcccatctcccag
cgctaccggccctactctgtcacctctcccttggggatctccaccccccctagccccaga
ctggctagcctccctggccctatcactgaaggtctcccggtaccgcccatcattctggcc
ccggccccaccactaccaactagcccccagtcggttcccctcccctccactagtcctcat
cggcccacctccatgcccctccctctggtacccccctcacccagatcagccgcccgagga
gctgccctcgccacccggatcccgtctagccccctatccctcctgttcttcgccctctct
gatatgtctcaggacaacagcgacgaagagcctgaggatgagcaggaggaagattttacg
caggtccagtttgggtccagtctgggtgtgtccggagggggaatggcctgggaatcctgc
ggtgaccggttcaccatcgaagcgtgcaaggagacagagatgctcaactacctcatcgag
cgctttgacagtgtgggcatggaggaaaggaaggcgcccaagatttgcagccaccccagt
gtcagccagctcctcagcaacatacgctcgcagtgtatttcccacgccgttcttgtcctt
cagggtgccctcacgcagcccaggaatcctctgcagcagtccctgctggtaccctacatg
ctgtgccgtaacctgccgtatggctttatccaggagctggcccgcattacctaccaggag
gaggaggtcttcagacagatctttgttccgatccttcaagggctgggtctggctgtgaaa
gaatgttcctttgacagtgacaacttcaaattccccctgatggcattagctgagctatgt
gaaatcaagtttgggaagactcaccccatgtgcaatttgatgacgtctctgcccctgtgg
tgtcctaagtctctgagcccggggactggccgagaggtccagagactctccttcctggga
gccttcttcagcctgtcggtctttgcagaggatgactccaaagttggtgacaagtacttc
tcgggccctgcgatcaccacagagaacactcgcgtggtcagtcagtccctgcagcactac
ctggagtcagcccggggtgaaatgtttaaaatcctccacaacatcctcctgaatggagag
accagagaggtagctctcaactatatggcagctctggtcaaccgcaatgtgaagaaagcc
cagatgcagacggacgacaagrtggtgtccacggacggcttcatgatcaacttcctgtcg
gtgctgcagcagctgagcatgaagatcaagctggagacggtggacccctattatatcttc
cacccgcactgccgcctgcatgtcagccccgaggagacccggctcaaggccaccatggaa
gagctcaagacctggctggccgagatgtacaacgacccctctaagttctctgagcccaag
ttccccacagagtgtttctttctgacgctgcacacccaccacctgtccatcctaccgggc
tgccgacgctacatccgcaggctgagggccatccgcgagctcaacaggaccgtggaggag
ctgaagaacagtgagagccagtggaaggactctccgctggccagccgacaccgagagatg
ctaaagagatgcaaaacccagctcaagaaactggtgcgctccaaagcctgtgccgacgca
gggcttctggatgagaaccttttacgcagatgtctgcagttctacagtatggtcattcag
ctcatcctacgcatggtggatcccgcctacccacacatgagtctaccgctgaatccggag
attcccaaaagctttgctgctctgccggagttttacattgaagatgtggccgagttcctg
cttttcgttgtgcagtattcccctcaggtcctgtatgagccctgtgtccaggacattgtc
acttttctggtggtgttcatctgcagtcagaactacatccggaacccctacctgatcgcc
aagctggtggaagtgctttttgtcaccaacccggcggtgcagctgcgcacccagcgcttt
tccgagatgatggagaaccaccccctgtccgtcaaacagttggtcccggccctcatgaag
ttctacacagatgtggagcacaccggtgccaccagtgagttctacgataagttcaccatc
cgctaccacatcagcaccatcttcaagagtctctggcagaacatgggccaccacggcaca
ttcctggaggagttcaactctggcaagcagtttgtgcgctacatcaacatgttgatcaac
gacaccaccttcctgctggacgagagcctggagtccctaaagcgcatccatgaggtccag
gaggagatgaagaacaaggagcagtgggatcagcttcccagggagcagcagcagagccgc
cagtcccagctgacccaggacgagcgggtgtcacgctcctacctggcactggccacagag
acggttgacatgttccacatccttaccaagcaggtccagaagcccttcctrcggcccgag
ctggggcctcgtctggcggccatgctgaactttaacctccagcagctttgcgggccgaag
tgccgggacctgaaggtggagaacccagagaagtatggttttgagcccaaaaagctcctg
gaccagcttactgacatttacctgcaacttgactgtgcccgctttgccaaggccatcgct
gacgaccagcggtcgtacagtcaagaactctttgaggaagttatttccaagatgacgaaa
gccggcatcaagtctaccatcgccattgaaaaattcaagctactatcggagaaggtggag
gagatagtcgcaaggaactctcagtccgaaatggactacagtgacgcacctgacgagttt
aaagaccctctgatggacaccctaatgacagaccctgtgatattgccctctgggaacatc
atggaccgagccatcatcctccgccaccttctcaactcccccactgaccccttcaacaga
cagccgctcaacgaaagcatgctggagtcactccctgaactgaaggagaggatccaggca
tggatgagagagaagcaaggccagggacgtttcctctaa
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integrated database retrieval system
