Salvelinus sp. IW2-2015 (Arctic char): 111966632
Help
Entry
111966632 CDS
T05762
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111966632
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111966632
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111966632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
111966632
NCBI-ProteinID:
XP_023847227
LinkDB
All DBs
Position
LG7:23727642..23736473
Genome browser
AA seq
567 aa
AA seq
DB search
MLTSYVYKRQKVTRDLLDERTAIVEGYNSYFSFSRGRSGYSGVATYCKDSATPFAAEEGL
TGLLTTNHEGTIGCYGDPREFSSEELQLLDNEGRAVLTQHRVMCEDTPETVTVINVYCPR
ADPEKPERKNFKLQFYKLLQCRAEAILEAGSRVIILGDVNTSHRPIDHCDPDYIDDFDDH
PGRKWLNGLLVDDSEGKDYGKNDEEESENTSSKPLSSGKFVDTFRHFHPTRSKAFTCWNT
MTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEVEGSDHCPVWGKLCCPLLSSSKLPP
FCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRDPLPGSQETGETRENLNPLGSAGTSS
TGKKRKLAVESGVPKSKKIMTLKAATPKPQGNLLAFFKPKSMPVAPTREDPVSQCERGEE
RNEVTPSQPHTFKGGHSAGQDVPSIPGTRTEDPQGVCMGDNVHEPGSNIQGVNNQNQGKD
VALASEATVDPPCLRKGASLGGFWKTVLRGPPPPPPCKSHGEPCVLRTVKKAGPNMGKQF
FVCNRPQGHASNPEARCNFFSWVDKGK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctgacatcgtatgtgtacaagagacaaaaagtaacaagagacctgttggatgagagg
actgctattgttgaaggttataactcctatttcagctttagtcgtggacgcagtggctac
tcaggagttgctacttactgcaaagacagtgccaccccatttgctgcagaggagggcttg
accggtctgctgaccaccaaccacgaggggaccattggatgctatggtgacccgagagag
ttctccagtgaggagctacagctcctggacaacgagggaagggctgttctcacacagcac
agagtcatgtgtgaagacacacctgaaacagttacggttatcaatgtatactgcccacga
gctgacccagaaaagcctgaacgtaaaaatttcaaactgcagttctacaagctgcttcaa
tgtcgggctgaagcaattttggaagctgggagccgtgtaatcatcttgggagatgtgaat
acatcccaccggcccatagatcactgtgacccagattacatagatgattttgatgatcac
cccggcaggaaatggctaaacggtttactggttgatgacagtgaaggaaaggactatgga
aaaaacgatgaggaagagtctgagaatacctcatcaaaacccctcagcagcggcaagttt
gtggacaccttccgccattttcacccaacacgctccaaggccttcacctgttggaacact
atgactggagccaggcagaccaactatggcacacgtatcgactacatcttcgcagaccat
cccttggttaaaatggggtttgtggcagcagacatcatgccagaggtggaggggtctgat
cactgccctgtctgggggaaactgtgctgccccctcctgtccagctccaagctgcctccc
ttctgtacccgcaacctaccagagttcgctggcaggcagcagaaactctcacgcttcctc
gtcaagatggaccaacaacaacctgccagagaggcctgcagggacccactaccaggatct
caggagactggggagacccgagagaacctgaatccactgggatcagcagggaccagctcc
actggaaagaaacggaagttggcagtggaatctggtgtcccaaagagcaaaaagattatg
acactgaaggctgctaccccaaagccccagggcaacctcctagcctttttcaagcccaaa
tccatgcctgtggccccaaccagggaagaccctgtgagtcagtgtgagaggggagaagag
agaaatgaagtgaccccatcacaaccacataccttcaagggaggacattctgcaggacaa
gatgtcccttcaattccaggcacgcgcacagaagatccccagggtgtctgtatgggagac
aatgtccatgaaccgggcagcaacatacagggtgtcaataatcaaaaccaggggaaggat
gtagccctggcttcagaggctactgtagaccccccatgtctcaggaagggggcttcactg
ggtgggttctggaagacggtcctgcgtgggccacccccaccgcccccctgtaagtctcat
ggggaaccctgtgtactccgcacagtcaagaaggcaggtccaaacatgggcaagcagttc
tttgtgtgtaaccgccctcagggtcatgcatccaatcctgaggctcgctgtaacttcttt
tcctgggtggataaaggaaaatag
DBGET
integrated database retrieval system
