Salvelinus sp. IW2-2015 (Arctic char): 111966778
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Entry
111966778 CDS
T05762
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00512
Mucin type O-glycan biosynthesis
salp00514
Other types of O-glycan biosynthesis
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
111966778
00514 Other types of O-glycan biosynthesis
111966778
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111966778
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
111966778
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 3 chain
111966778
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
111966778
NCBI-ProteinID:
XP_023847473
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Position
LG1:37395256..37407587
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AA seq
406 aa
AA seq
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MKTLGSRCAFLIGFLVGTCTLYVFLRQVWFERTFSTRSQPDGLEKTAAQLRELEEDSKNW
KKERSALFNLNHPHHKGQDSHMADELYKKVRILCWVMTGPNNLQKKARHVKNTWSRHCNV
VVFMSSVDDPDFPTVGLGTKEGRDQLYWKTIRAFHYALENHGDEADWFLKADDDTYVVVD
NLRWVLANHTPEEPIYFGRRFKPYTKQGYMSGGAGYVLSKEALKRFVDGFKTKVCTHTTH
VEDLAMGQCMEKVGVVAGDARDTNLRETFHPFVPEQHLTSKFPKSFWYWSYCYYPISEGP
NCCSDLSVSFHYVDASLMYLLEYYTYHLRAFGYRYRYQPPAPLGYKNEAWDRSEGGHSYX
KEQPAIQRGPLARVESPSRTDRKQEVMPPAAAGEKDPPAAAQDDKQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgggctcgcgctgtgccttcctcataggcttcctggtggggacctgtacg
ctctatgtgttcctacgtcaggtgtggttcgagaggaccttctccacacgttctcagccc
gatggcctggagaagacagcggctcagctacgtgagctggaggaggacagcaagaactgg
aagaaggagaggtcggctctcttcaacctcaaccacccccaccacaaaggtcaggacagc
cacatggcagacgagctgtacaagaaggtgcgcatcctttgctgggtgatgacagggccc
aacaacctgcagaagaaggcccgccacgtaaagaacacctggagccgccactgtaacgtg
gtggtgttcatgagctctgtggacgaccctgacttccccactgtggggctgggcaccaag
gaaggccgcgaccagctctactggaagaccatccgggccttccactacgccctggagaat
catggagacgaggccgactggttccttaaggctgacgacgacacctacgttgtcgtggac
aacctgcgctgggtgctggccaaccacacgccagaggagcccatctactttggacgcagg
tttaagccctacaccaagcagggctacatgagtggcggggcaggctacgtgctgagcaaa
gaggcccttaagaggtttgtggatggctttaagaccaaggtgtgcacccacaccacccac
gtggaggacctggccatgggccagtgcatggagaaggtgggggtggtggccggggacgcc
agagacaccaacctcagggagaccttccacccctttgtccctgagcagcacctcacctcr
aagttccccaagagcttctggtactggagctactgctactatcccatctcagaggggcca
aattgctgctcggacctgtctgtgtctttccactatgtggacgcgtctctcatgtacctg
ttggagtactacacctaccacctgcgtgcctttggctacaggtaccgctaccagcccccg
gcccccctgggctacaagaatgaggcatgggacaggtcagagggtggacactcgtacwcc
aaagagcagccggccatccagagggggccactggcgagggtggagagtccgtccaggaca
gacaggaaacaggaagtgatgcctcctgctgcagcaggggagaaagacccgcctgctgcg
gcacaggatgacaagcagtag
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