Salvelinus sp. IW2-2015 (Arctic char): 111966793
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Entry
111966793 CDS
T05762
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111966793
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111966793
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111966793
Nuclear receptors [BR:
salp03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111966793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111966793
NCBI-ProteinID:
XP_023847494
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Position
LG7:complement(28997221..29044365)
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AA seq
509 aa
AA seq
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MFDCMEALGMGPRQLYDVTSRGACMLRKASPFFAGLDPFAWTGSASVQSVETQSTSSEEM
VPGSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEGERPVRNDRNKKKKDVKEELVLPESYELSGELEEL
VNKVSKAHQDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKIVEFAKRLP
GFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEALKIYARRRR
PNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTESS
GESSPPPAPPPVPPASSKPPATMKTEAEDEEDSWGTENGSEPSPEEEDEDDYDDGEEEDR
DRGSDSEGESWALEGSSEGARKNHAGRAQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggaagctctggggatgggcccacgccagctatatgatgtcaccagc
cggggtgcgtgcatgctgcggaaggcgagccccttcttcgcagggctggaccccttcgct
tggaccggcagcgccagcgttcaatcggtggagacccagagcaccagctctgaggagatg
gtccccggctctccctctccacctcccccaccacgcatctacaaaccctgcttcgtgtgc
caggacaagtcctctggataccattacggagtcagttcctgtgagggctgcaagggtttc
ttccgacgcagtatccagaagaacatggtgtacacctgccaccgagacaagaactgccag
atcaacaaggtcaccaggaaccgctgccagtactgccgactgcagaagtgctttgaggtc
ggcatgtccaaggaaggtgagagaccggtgcgtaatgacagaaacaagaagaagaaagac
gtgaaggaggagttggtgttgccagagagttatgaattgagtggagaactggaggagctg
gtcaacaaagtcagcaaagcccaccaagacaccttcccctcactgctgcagctgggcaaa
taccacaccaactccagtgcagagcagcgcgtgcagctggacctggggctgtgggataag
ttcagtgagctttccaccaagtgcatcatcaagatcgtggagtttgccaagcgcctcccc
ggmttcaccaccctcaccatcgctgaccagatcaccctcctcaaatcagcctgcctggat
atcctgatgttgaggatctgcacccgctacaccccagagcaggacaccatgaccttctca
gacgggctgaccctgaaccggacccagatgcacaacgcaggcttcggcccgctcacagac
ctggtgtttgcctttgctggccagctgctgcctctggagatggacgacacagagacgggc
ctcctcagcgccatctccctcatytctggagaccgtatggacctggaagagccccagaag
gtggacaagctgcaagagcccctcctggaggccctgaagatctacgcacgtcgcagacgc
cccaacaaaccacacatgttcccccgcatgctgatgaagatcactgacctcagaggcatc
agcactaagggggcagagagagccatcactctgaagatggagatcccaggccccatgcct
cctctgatcagggagatgttagagaacccagaggccttcgaggaccaaacagagagcagt
ggagagagctccccaccgcctgcccctccacccgttccaccagcctcctccaagcccccc
gccaccatgaagactgaggctgaggacgaggaggacagctgggggacagagaatggcagc
gagccttccccagaggaagaagatgaggatgactatgatgatggggaggaggaggaccgg
gacaggggctcggacagcgagggggaatcctgggctctggagggtagcagcgaaggggct
aggaagaaccatgccgggagggcgcagtga
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