Salvelinus sp. IW2-2015 (Arctic char): 111966853
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Entry
111966853 CDS
T05762
Name
(RefSeq) keratin, type II cytoskeletal cochleal-like isoform X1
KO
K07605
type II keratin, basic
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111966853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111966853
04147 Exosome [BR:
salp04147
]
111966853
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
111966853
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111966853
Exosomal proteins of other body fluids (saliva and urine)
111966853
Exosomal proteins of colorectal cancer cells
111966853
Exosomal proteins of bladder cancer cells
111966853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
CENP-F_leu_zip
TPR_MLP1_2
ADIP
ATG16
Sec10_N
CCDC113_CCDC96_CC
Phage_GP20
Crescentin
Prefoldin
COG6_N
DUF4349
Motif
Other DBs
NCBI-GeneID:
111966853
NCBI-ProteinID:
XP_023847580
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All DBs
Position
LG7:complement(33161432..33166373)
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AA seq
624 aa
AA seq
DB search
MSISYKSSGSMSGGFGSSRGFSSGGGGGGGGSVRKSFSSFSSSAVPMGSSRMSSSSVRRS
VGGSGGGGFGLGGGGGGGVSSYSYMSGGGGMGGGGGMGGGGGGGSFGMGGGSGGFGLGGG
GGGFGLGGGGGGGGFGLGGGGGGYGMGGGGGGFGMGGGGGGFAPITAVTVNTSLLAPLNL
AIDPNIQTVRTQEKEQIKGLNNRFASFIDKVRFLEQQNKMLETKWSLLQDQTTTRSNIDX
MFEAYIANLRRQLDGLGGEKVKLEGELMNMQGLVEDFKNKYEDEINKRASVENEFVXLKK
DVDGAYMNKVELEARVDSLQDEINFLRAIYEAELSELQGQIKDTSVVVEMDNSRNLDMDS
IVAEVRAQYEDIANRSRAEAESWYKQKFEEMQSSAGQHGDDLRNTKAEMAELNRMISRLQ
NEIENVKGQRANLENQIAEAEERGEMAVKDAKLRIKDLEEALQRAKQDMARQVREYQELM
NVKLALDIEIATYRKLLEGEESRITGGGTGGGIATIHVQTSSSGGGGGGSGGGFGMGGGG
GGGGGGFGYGGGSGMSMKSSSGFGMSSGGGGGFGGGGGGFGMSGGGGGSGFGMSGGGGSG
YGMSGGGGSVSQSRSSMTSSSRRF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagttacaagagcagtggcagcatgagcggaggcttcggctccagcagagga
ttcagctccggcggtggtggcggcggcggcggtagtgtgaggaagagcttctccagcttc
tcctcttcagcagttcccatgggctccagccgtatgagcagctcgtcggttagacgctct
gtaggcggcagtggtggaggaggcttcggcctgggcggtggtggtggtggaggagtctcc
agctacagctacatgagcggtggtggaggcatgggcggtggcggaggcatgggcggtggc
ggtggaggtggaagcttcggcatgggcggcggcagtggaggcttcggcctgggcggcggt
ggtggaggctttggcctgggcggtggcggtggcggtggaggcttcggcctgggtggtggc
ggtggaggctacggcatgggcggcggcggtggaggcttcggcatgggtggcggcggcggc
ggcttcgccccaatcacagctgtcacagtcaacacaagcctgctagcccccctcaacctg
gcgatcgaccccaacatccagaccgtccgtacccaagagaaagaacagatcaagggtctc
aacaaccgcttcgcctccttcattgacaaggtacgcttcctggaacagcagaacaagatg
ctggagaccaagtggagcctcctgcaggaccagaccaccacccgctccaacatcgacrcc
atgttcgaggcctatatcgcaaacctgcgcagacagctggacggcctgggaggagagaag
gtcaagctggaaggagagctgatgaacatgcagggtctggtggaggacttcaagaacaaa
tatgaagatgaaatcaacaagcgtgcctcagtggagaatgagtttgtcytmctcaagaag
gatgttgatggcgcctacatgaacaaggttgagctggaggccagggttgactcccttcag
gatgagatcaacttcctcagggccatctatgaagcggagctgagtgagttgcagggacag
atcaaggacacctcagtggtggttgagatggacaacagccgtaacctggacatggactcc
atcgtggctgaagtgcgtgcccagtatgaggacatcgccaaccgcagcagagccgaggcc
gagtcatggtacaagcagaagtttgaagagatgcagtcctctgcaggacaacatggtgat
gatctgcgaaacaccaaggcagagatggccgagctgaaccgcatgatcagccgtctccaa
aacgagatcgaaaacgtcaaaggacagcgtgccaacttggagaaccagatcgccgaggct
gaggagcgcggggagatggcggtgaaggacgccaagctccgcatcaaggacctggaggaa
gccctccagagagccaagcaggacatggcccggcaggtgcgcgagtaccaggagctgatg
aatgtcaaacttgccctggacattgagatcgccacctacaggaaactactggaaggagag
gagagcaggattaccggaggtggaactggaggtggaattgcaaccatccacgtacagacc
tccagcagcggcggcggtggcggcggctccggcggtggattcggcatgggtggtggtggt
ggaggcggtggaggtggcttcggatatggcggtggcagtggcatgtccatgaaaagcagc
agcggcttcggcatgagcagcggtggcggcggtggattcggcggcggcggcggcggattc
ggcatgagcggtggcggcggcggcagtggattcggcatgagcggcggtggcggcagtggc
tacggcatgagcggcggcggtggtagtgtctcacagtcccgttcctccatgacctcctca
tccagacgcttctaa
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integrated database retrieval system
