Salvelinus sp. IW2-2015 (Arctic char): 111966906
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Entry
111966906 CDS
T05762
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04514
Cell adhesion molecules
salp04672
Intestinal immune network for IgA production
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111966906
04514 Cell adhesion molecules
111966906
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111966906
09142 Cell motility
04820 Cytoskeleton in muscle cells
111966906
04810 Regulation of actin cytoskeleton
111966906
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
111966906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111966906
04515 Cell adhesion molecules [BR:
salp04515
]
111966906
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111966906
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin beta subunits
111966906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
111966906
NCBI-ProteinID:
XP_023847625
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Position
LG1:37790002..37807269
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AA seq
763 aa
AA seq
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MVGIFILGTFLLYCVGQNQIQGVPQGCVSQPSCSACLRSPGCAWCKHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRLDPVFLKNNDLSSNPGNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILSALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRLNICQPAFSFQNVLRLTEDVDKFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGMCHLNDTGFYDG
TKYDYPSVGQLARVLETNNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYSNLSSTILLEHHEAPSGLDVTYRSHCTPEKGDNTPWQRRGECMDVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNEIGTLTCGICSCD
EGHLGQRCECERPKDMTSADSMAATCRQDNSSQLCSGHGSCECGMCTCQGIHRGNFCQCD
DNSCARHNNMLCGGNGQCDCGTCKCNDNYTGSACDCSKLTDQCRTVGKLCNGQGTCQCNQ
CQCNKHFFGINCSKIANACPKFLDCVTCELEKKKSSSLKSNCSQLCGSVKVTWMKGPQEF
PCSKDTISYKVELLPDGNILIFYADLPRSIDKTYVIIGSSVSSIIFIGIAVILISRLMLE
LHYRREYDSFLKAKEAEVWQDTKNPLFQDATTVVMNPMHIQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatattagggacctttctcttgtactgtgtgggacagaaccaaatt
caaggggtcccccaaggatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggagagtccagtgagcggagg
tgtgacactgctgagtctctgaggaccaggcgttgtgagcagatggacatcatcaacccc
cgattagatccagtctttctgaagaataatgatctcagcagcaacccaggcaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagttggagtccctcagaccttcaat
gtgtcattcaagagagccgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctctgcg
ctgaaaaaagtcacccagaaggtccgcataggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaagccaagaagaataacccctgtcccaaccgcctgaac
atctgtcaacctgccttcagcttccaaaatgttctgagactcacagaagacgtggacaag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgacgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccacattgccggggatggcaggctggct
ggtatattcgagcctcatgacggcatgtgccatctcaatgacactggcttctacgatggc
actaaatatgactacccgtcggttggccagcttgccagggtcctggaaaccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggagtcctgaagaacgactccagcaacgtggtcctgctcatc
tcagaggcctacagtaacctgtcctccaccatcttactggagcaccatgaagctccctca
ggtctggacgtgacctacagatcccactgcacccctgaaaaaggggacaacaccccgtgg
cagaggaggggcgagtgcatggacgtcaagctcaaccagcaggtcaacttcacggtaagc
ctgaacatctcaacatgtctgaaggagaagcagacgttttccctaaaactgcagggcatc
agcgagactctgaaggtctctgtggaaaccctgtgtgactgtgactgccaagacagagaa
gagcagtcctcacactgcaatgaaattggaacgctcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagcggcctaaggacatgacctctgccgac
tctatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagcgggcatgggagc
tgtgagtgtggcatgtgtacgtgtcagggcatccaccgcggcaatttttgccaatgtgat
gacaacagctgtgcccgccacaacaacatgctctgcggtggtaatgggcagtgtgactgt
ggaacatgtaagtgtaatgacaactacacaggctctgcatgtgactgttccaaactcacc
gaccagtgcaggactgttgggaagctgtgcaatggccagggaacatgccagtgtaaccag
tgccagtgcaacaaacacttctttggcataaactgctcaaagattgccaacgcatgccca
aaattcctggactgtgtgacatgtgaattggagaaaaagaagagtagcagcctaaagagt
aactgcagccaactctgtggctcagtcaaggtcacttggatgaaggggccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtggagctgttgcctgatggcaacatcctg
atcttctacgcagatctgcctcgctctattgacaagacttacgtgatcatcggcagctct
gtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagcaggcttatgctagag
ctccactaccggagagagtatgacagcttcctcaaagcaaaggaggccgaagtctggcaa
gatacaaaaaatcccttgttccaggatgccacgaccgtggtcatgaaccccatgcacatt
caagaggactga
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