Salvelinus sp. IW2-2015 (Arctic char): 111966922
Help
Entry
111966922 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111966922
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111966922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
DUF2573
RasGEF_N_2
PKcGMP_CC
Fib_alpha
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
111966922
NCBI-ProteinID:
XP_023847637
LinkDB
All DBs
Position
LG7:13701511..13747178
Genome browser
AA seq
1845 aa
AA seq
DB search
MLVCYRCRCTVFCIEAFRMAFCQNRLTSAMAAYLGIFILALSVVGQQLPSSPHGCMEGSC
YPATGNLLIGRAINLSATSTCGLHGPEHYCIVSHLQELDKCFACNSQHPYDPYNHKNSHR
VKNVIQLKDSNEDLTWWQSVNGEEGVSIRLNLEAEFHFTHLIMKFKTFRPAAMLIERSAD
FGRSWRPYRYFAYNCTKTFPRVPAHALHYINDVICEERYSDIEPSTXGEVIYKVLDPAIH
VKDPYSLEIQELLRITNLRINFTKLHTLGDNLLDRRSDVLQKYYYSLYELVVRGSCFCYG
HASECAPVPGVDARDSGMIHGRCVCKHNTEGLNCERCRDFHNDLAWSPAEANDPHTCRRC
NCNGXTPQCHLKHGGDGTGNAGGGVCDHCLHNTMGRNCEMCKPFYYKDPSRDIRDPAACT
ACDCDPVGSMEGGVCDSHTDLDMGMIAGQCRCKLNVKATRCDYCKEGYYGLAHNDPQGCQ
PCNCDPRGTIILGAPCDQISGDCSCKRYVTGRYCNQCLVRLALCMVENGQCDCRRHLIGR
QCSDVQPGYFCAPLDYYKYEAEDAVGHSPSDHNLPGKARPQAEIDCVEHLNNQLRRHRRH
RRIATTQQQRAALRRIRQLQQTPDVRSVHRERSQGHMVTWTGPGFARVKDGAGLVFTIDN
IPHAMEYDIMIRYEPESTEDWETIVSVTSLLLPTSSRCGNLLPTEQLYTVTLPHNRRYVQ
MPRPFCFEPSNRYVVAIRFQRHGVSQRHLTAFILVDSLVLIPKYTELLGFQGNDPAAEER
RDEMVRYMCLDSFMAMPMPMLAEMCTKLICSISAILHDGALQCQCDPQGSLSAECDRVGG
QCRCKPNVIGQRCDQCAPGTYGFGPYGCTACDCHSQGSLGHQCDPVTGQCPCRQGASGRQ
CSDCQPGQWGFPSCRPCQCNGHTDDCNPQTGECQTCRDYTDGQYCERCVNGFFGNPVLGS
GDHCRPCPCPGNPGSGHSNGDSCHTDISSNQILCNCKQGYTGPRCERCAPGYYGNTEHPG
GQCHTCQCSGNIDTQDPESCDPRTGQCLRCLYNTDGASCSDCKRGYFGNALAQDCRRCTC
VTAGTQQSYCTAGHCHCDRQTGACPCRDNVVGHNCDQCAPDYWNYGTDRGCERCGCHPLH
AMGSHCNMFSGQCHCQQGFGGRQCTECEQFHWGDPRVQCEECNCHPLGSEMAQCDRVTGV
CECREGAVGRQCDECARGFTGVFPKCVRCHPCFELWDDAVCMIRRDLDHIHHEIHKILES
GETPGVGDKRISELENKLAQVQNLIQDGDWDRLHQLIGQSIDDLRAEIALTDGRLMGVAR
ELNGTAVQDEVLRRNLTQMERELRDLNTTLMHHRQKQENNISSGFQDQFDNVKKYYSESQ
KAQQKCSSSVSGPFSPVEESKATRAHTEDLLNKRRDKFLRTVAAQKKSLSELQNKAQDVD
KKVHHLSHKVCGGHSNASSNGTCHDSPCGGAGCRDNDGRRVCGGDGCDGTXSASLQGLKH
ANDVTDNLTAASEDLQGMAKKLQDIAMLTQDVNNQAMDTLDKAQKKKDLFENSNKKLKEF
IQKIKDFLTEEGADPESIEKVAQQVLAISLPVNRTTLDSMVQQIKDNINNLTDVEGVFNH
TSQQLHQAKELLNRAKDAKTRAEGVKDTANMTKQALDASEKAIQKATKALDHALNNLNST
RNTTATVEENLQDLEVKQMDAMMRLANLSMGVEALKTKTNQNREMAQDAKNQAENATNAA
SGLKQRLNETEDRYKELQMKVDSLGGASGGLGNVNQRAKEIKKEAEDLLTKANKGIETLR
KLEKKFRNNEQKMLXQQSELGELERNATEAREAIRKQVQTYNNCN
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgttagtctgttacagatgcagatgtacagtgttctgtattgaagccttccggatggcc
ttctgtcaaaatcgactgacatccgccatggctgcatatctgggcatatttattttagct
ctgagtgttgtgggacagcagctcccctccagcccgcatggctgcatggagggcagctgt
tacccggcaacaggcaacctgttgattggccgagccattaatctcagcgccacctccact
tgtggtcttcatgggccagaacactactgcatagtcagccacctgcaggaattggacaag
tgttttgcgtgtaactctcagcatccttatgacccgtacaaccacaaaaacagtcaccgc
gtgaagaacgtcatccaactcaaggacagcaacgaagacctcacatggtggcagtccgtc
aacggagaggagggtgtcagtatcagactcaatctggaggcagaattccacttcactcac
ctcatcatgaagtttaagacattccgaccggccgccatgctgatcgagcgttcggctgat
tttggtcgctcctggagaccgtaccgttattttgcctacaactgcaccaagacgttccca
cgcgtgcctgcccacgccctccactacatcaatgatgtcatctgtgaggagagatactct
gacatcgagccctccacgyaaggagaggtcatttataaagtgctkgaccctgccatacat
gtgaaagacccatacagtctggagattcaagagctgttgcggatcaccaacctgcggatc
aacttcaccaagctgcacaccctgggagataacctgctggaccggcgctctgacgttctg
cagaagtactactactccctgtatgagctggtggtgaggggcagctgcttctgctacgga
cacgcctcagagtgtgcccccgtgccaggggttgatgccagggacagtggcatgatccat
gggcgatgtgtgtgtaaacacaacactgaggggttaaactgtgaacgctgcagagacttc
cacaacgacctggcctggagcccagccgaggccaacgaccctcacacatgcagaagatgt
aactgtaacggcngcactccacagtgtcatttgaagcatggcggtgacggcacgggcaat
gccggcggtggcgtctgtgaccactgtctccacaacaccatgggacgcaactgtgagatg
tgtaaaccattttactacaaggaccccagcagggacatcagagaccccgccgcttgtact
gcgtgtgactgtgatcctgtgggctccatggagggaggtgtgtgtgacagccacacagac
ctggacatgggcatgatcgccgggcagtgccgctgtaagctcaacgttaaggccacccgc
tgtgactactgcaaggagggttactacggcctggcccacaacgacccacagggctgccaa
ccgtgtaactgtgaccctcgtgggaccataatcctgggagcaccatgtgaccagatcagt
ggggactgctcctgtaagagatacgtcacaggccgctactgcaaccagtgtctggtaaga
ctggccctgtgtatggtagaaaatggccagtgtgactgtaggaggcacctgattggtcgt
cagtgttctgacgtgcagcctgggtacttctgtgccccgctagactactacaaatatgag
gcagaggacgccgttggccactcacctagtgaccacaacctcccgggcaaggccaggccc
caggctgagattgactgtgtggagcacctcaacaaccagctgaggagacacagacgccac
agacgcatcgccaccacccagcagcagagggcagcactgagacgcatccgccagctgcag
caaacgcctgatgtaaggagtgttcacagggagagatctcagggtcacatggtcacctgg
actggacctggttttgcccgggtcaaggatggcgctggactggtcttcacaatagacaac
atcccccatgccatggagtatgacatcatgatccgctatgagccagagtctactgaggac
tgggagaccatagtgagtgttacctccctgctgctgcccaccagctcccgctgtggcaac
ctgcttcccactgaacagctctacactgtcaccctgccgcacaacaggaggtatgtccag
atgcccaggcctttctgctttgagcccagtaaccgttatgtcgtggccatcagattccag
cgccacggagtgtcccagagacacctgaccgctttcatccttgttgattcgctggtgctg
atccccaagtacacggagctgcttggtttccagggtaacgaccccgcggcggaggagcgc
cgtgatgagatggtgcgctacatgtgtctggactccttcatggccatgcccatgcccatg
ctggcagagatgtgcaccaagctcatctgcagcatctctgccatcctgcatgatggagct
ctgcaatgtcagtgcgacccccaggggtctctcagtgctgagtgtgacagggtcggaggt
cagtgtcgctgtaaacccaacgtgattggacaacggtgtgaccagtgtgcacctggcact
tacggctttggaccatatggctgtactgcctgcgactgccattcccagggctctctgggg
caccagtgtgacccggtgacggggcagtgcccgtgcagacagggggccagcgggcgccag
tgttcagactgccagcctggccagtggggctttcccagctgcaggccatgccagtgtaac
ggtcacactgatgactgcaacccgcagacaggggagtgccagacctgcagagactacact
gatggacagtactgtgaaaggtgtgtgaatggtttctttgggaacccagtgctggggtct
ggagatcactgtcgaccatgtccctgtcctgggaacccaggaagtggacactccaatggg
gactcctgtcacactgacatctcatccaatcagatcctctgcaactgtaaacagggatat
acaggccctcgctgtgaacgctgtgcccctggttactatggcaacactgagcacccaggc
gggcagtgccacacctgccagtgtagtggcaacatcgacacccaggacccagagtcatgt
gaccccaggacaggacaatgcctgaggtgcctgtacaacacggacggcgcctcctgctcc
gactgtaaacgtggttacttcggcaacgccctggcccaggactgcaggcgttgcacatgt
gtaacagcaggtacacagcagtcctactgcactgccggtcattgccactgtgacagacag
acaggagcatgcccgtgtcgggacaacgtggtcggccacaactgtgaccagtgtgccccc
gactactggaactatggcacagacagagggtgtgagcggtgtggctgccaccctctgcac
gctatgggatcacattgcaacatgtttagtggacagtgtcactgtcagcaaggctttggg
ggaaggcagtgcactgagtgtgagcagttccattggggagacccacgtgtgcagtgtgaa
gagtgtaactgtcaccctttgggctcggagatggcccagtgtgaccgtgtgacgggggtg
tgtgagtgtagggagggggcggtggggcggcagtgtgacgagtgtgcccgcgggttcacc
ggggtattccctaagtgtgtccggtgccacccctgctttgagctgtgggacgatgcagtg
tgtatgatccgccgggacctggaccacatccaccatgaaatccacaagatcctggagagc
ggagagacgcccggggtgggagacaaacgcatcagcgagctggagaacaaactggcccag
gtacagaacctgatccaagacggagactgggacagactacaccagctgattggccagtcc
atcgatgacctcagagcagagatagctctgactgacggccgtttgatgggtgtggcccgg
gagctgaatgggacagcggtgcaggacgaggtactaaggaggaacctgacccagatggag
agagaactcagggacctcaacaccactctgatgcaccaccgccaaaaacaggagaacaac
atcagctctggtttccaagatcagtttgacaatgtgaagaagtactacagtgagtcccag
aaggctcaacagaagtgcagctcctcagtgtctggtcctttcagccccgtggaggagtct
aaagcaacacgcgcacacaccgaggaccttctgaacaagaggcgggataagttcctgcgc
acggtggcggcccagaagaaatcattgtcagagctgcagaacaaagcccaggacgtagac
aagaaagtccaccacctgagccacaaggtatgtggtggccattccaatgccagctccaat
ggcacatgtcacgacagcccatgtgggggtgctggttgtcgtgacaatgacggtcggcgg
gtgtgtggaggggacgggtgtgacgggactyttagcgcctccctacagggactgaaacat
gccaatgatgtcacagacaacctgactgctgccagtgaggatctccagggtatggctaag
aagctccaggacattgctatgctgacccaggatgtgaayaatcaagccatggacaccctg
gacaaagctcagaagaagaaggacttatttgaaaactccaataaaaaactcaaggaattc
attcagaagatcaaagatttcctgactgaggagggtgcggacccagagagcatagagaag
gtggctcagcaggtgctggccatatctcttcctgtcaacagaaccactctggacagcatg
gtccagcagattaaagacaacattaacaacctgacagatgtagagggggtcttcaaccac
acctcccagcaactccaccaggccaaggagctgctcaaccgagctaaggatgccaagaca
cgagcagaaggagtgaaggacacagccaacatgactaagcaggcgttggatgcgtctgaa
aaggctattcagaaagcaaccaaagccctggaccatgctctgaacaacctgaacagcacc
aggaacaccaccgcaacggtggaggagaatcttcaggatctggaggtcaagcagatggat
gctatgatgcgactggccaacctgtcgatgggggtagaggcactaaaaactaagaccaat
cagaacagggagatggcccaagatgccaagaaccaggccgaaaatgccactaatgcagca
tcgggactgaagcagaggctgaatgaaacggaggatcggtacaaggaactgcagatgaag
gtggactctctgggtggggcctcggggggcctggggaacgtcaaccagagggccaaggag
atcaagaaggaggctgaagacctgctcactaaggccaacaagggcatagaaacgctacgg
aagcttgagaagaagttccgtaataatgagcagaaaatgctggwccagcagagcgagtta
ggagagctggagaggaacgccacggaagcacgggaggccatacgaaagcaggtgcagaca
tacaacaactgtaactga
DBGET
integrated database retrieval system
